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Properties of Polyfothine

Properties of Polyfothine (C15H13NO3):

Compound NamePolyfothine
Chemical FormulaC15H13NO3
Molar Mass255.26862 g/mol

Chemical structure
C15H13NO3 (Polyfothine) - Chemical structure
Lewis structure
3D molecular structure

Elemental composition of C15H13NO3
ElementSymbolAtomic weightAtomsMass percent
CarbonC12.01071570.5768
HydrogenH1.00794135.1331
NitrogenN14.006715.4870
OxygenO15.9994318.8030
Mass Percent CompositionAtomic Percent Composition
C: 70.58%H: 5.13%N: 5.49%O: 18.80%
C Carbon (70.58%)
H Hydrogen (5.13%)
N Nitrogen (5.49%)
O Oxygen (18.80%)
C: 46.88%H: 40.63%N: 3.13%O: 9.38%
C Carbon (46.88%)
H Hydrogen (40.63%)
N Nitrogen (3.13%)
O Oxygen (9.38%)
Mass Percent Composition
C: 70.58%H: 5.13%N: 5.49%O: 18.80%
C Carbon (70.58%)
H Hydrogen (5.13%)
N Nitrogen (5.49%)
O Oxygen (18.80%)
Atomic Percent Composition
C: 46.88%H: 40.63%N: 3.13%O: 9.38%
C Carbon (46.88%)
H Hydrogen (40.63%)
N Nitrogen (3.13%)
O Oxygen (9.38%)
Identifiers
CAS Number122908-91-2
SMILESCC1=C2C(=NC=C1)C3=CC(=C(C=C3C2=O)OC)OC
Hill formulaC15H13NO3

Related compounds
FormulaCompound name
CHNOIsocyanic acid
HCNOFulminic acid
CH3NOFormamide
CH5NOAminomethanol
CNOH5Methoxyamine
C2HNOFormyl cyanide
C3H7NOPropionamide
C2H3NOMethyl isocyanate
C3H5NOEthyl isocyanate
C4H7NOPropyl isocyanate

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Molecular weight calculator
Oxidation state calculator

Polyfothine (C₁₅H₁₃NO₃): Chemical Compound

Scientific Review Article | Chemistry Reference Series

Abstract

Polyfothine, systematically named 7,8-dimethoxy-4-methyl-5''H''-indeno[1,2-''b'']pyridin-5-one, is a synthetic heterocyclic organic compound with the molecular formula C₁₅H₁₃NO₃. This fused tricyclic alkaloid derivative exhibits a molecular mass of 255.27 g·mol⁻¹ and possesses a unique indenopyridinone scaffold. The compound demonstrates significant structural complexity with methoxy substituents at the 7 and 8 positions and a methyl group at position 4. Polyfothine manifests characteristic properties of aromatic heterocyclic systems with extended π-conjugation. Its chemical behavior is governed by the electron-deficient pyridinone ring system and electron-rich methoxy-substituted aromatic moiety. The compound serves as an important scaffold in medicinal chemistry research due to its structural features that mimic naturally occurring alkaloids.

Introduction

Polyfothine represents a class of synthetic heterocyclic compounds belonging to the indenopyridinone family. First reported in the late 20th century, this compound exemplifies the structural complexity achievable through modern synthetic organic chemistry. With CAS registry number 122908-91-2, Polyfothine has been characterized as a potential pharmacophore with specific biological activity profiles. The compound's structural framework combines elements of both indene and pyridinone systems, creating a rigid planar structure with distinct electronic properties. This molecular architecture provides a platform for investigating structure-activity relationships in heterocyclic chemistry and serves as a template for developing novel compounds with tailored properties.

Molecular Structure and Bonding

Molecular Geometry and Electronic Structure

The Polyfothine molecule adopts a nearly planar configuration due to the extensive π-conjugation throughout the tricyclic system. The central pyridinone ring exists in a slightly distorted hexagonal geometry with bond angles ranging from 118° to 122°. The indene moiety contributes to the overall planarity with dihedral angles less than 5° between ring systems. Carbon atoms at positions 7 and 8 exhibit sp² hybridization with methoxy substituents adopting orientations approximately 15° out of the molecular plane to minimize steric interactions. The carbonyl oxygen at position 5 maintains significant π-character with the adjacent carbon atoms, contributing to the electron-deficient nature of this region. Molecular orbital calculations indicate highest occupied molecular orbital (HOMO) electron density primarily localized on the methoxy-substituted aromatic ring, while the lowest unoccupied molecular orbital (LUMO) shows predominant character on the pyridinone portion.

Chemical Bonding and Intermolecular Forces

Polyfothine exhibits conventional covalent bonding patterns with bond lengths typical for aromatic systems: C-C bonds measure 1.39-1.42 Å, C-N bonds average 1.35 Å, and C-O bonds range from 1.36-1.43 Å depending on hybridization. The carbonyl bond (C5=O) demonstrates a length of 1.22 Å, characteristic of ketonic functionality. The molecule possesses a calculated dipole moment of approximately 4.2 Debye with direction toward the methoxy-substituted ring. Intermolecular forces include significant dipole-dipole interactions due to the polarized carbonyl group and π-π stacking capabilities arising from the extended aromatic system. The methoxy groups participate in weak hydrogen bonding as acceptors, while the molecule lacks strong hydrogen bond donors. Van der Waals forces contribute significantly to crystal packing arrangements, with calculated London dispersion forces of 45 kJ·mol⁻¹.

Physical Properties

Phase Behavior and Thermodynamic Properties

Polyfothine presents as a crystalline solid with pale yellow coloration under standard conditions. The compound melts at 217-219 °C with decomposition observed above 250 °C. Crystallographic analysis reveals monoclinic crystal system with space group P2₁/c and unit cell parameters a = 7.82 Å, b = 12.45 Å, c = 14.31 Å, β = 102.5°. Density measurements yield 1.32 g·cm⁻³ at 25 °C. The enthalpy of fusion measures 28.5 kJ·mol⁻¹ with entropy of fusion ΔS_fus = 58.2 J·mol⁻¹·K⁻¹. The compound sublimes appreciably at temperatures above 150 °C under reduced pressure (0.1 mmHg). Specific heat capacity at constant pressure measures 1.12 J·g⁻¹·K⁻¹ at 25 °C. Refractive index determinations yield n_D²⁰ = 1.632 for crystalline material.

Spectroscopic Characteristics

Infrared spectroscopy reveals characteristic vibrations: carbonyl stretch at 1685 cm⁻¹, aromatic C-H stretches between 3050-3100 cm⁻¹, methoxy C-O stretches at 1025 cm⁻¹ and 1085 cm⁻¹, and aromatic C=C vibrations at 1585 cm⁻¹ and 1620 cm⁻¹. Proton NMR spectroscopy (400 MHz, CDCl₃) shows methoxy singlets at δ 3.92 ppm and δ 3.95 ppm, methyl group resonance at δ 2.48 ppm, aromatic proton signals between δ 6.85-7.75 ppm with characteristic coupling patterns. Carbon-13 NMR displays carbonyl carbon at δ 190.5 ppm, aromatic carbons between δ 110-155 ppm, methoxy carbons at δ 56.1 ppm and δ 56.3 ppm, and methyl carbon at δ 21.8 ppm. UV-Vis spectroscopy demonstrates absorption maxima at 245 nm (ε = 12,500 M⁻¹·cm⁻¹) and 325 nm (ε = 8,200 M⁻¹·cm⁻¹) in methanol solution. Mass spectrometric analysis shows molecular ion peak at m/z 255.0895 with major fragmentation ions at m/z 240 (M-CH₃), 212 (M-CH₃-CO), and 184 (M-2×OCH₃).

Chemical Properties and Reactivity

Reaction Mechanisms and Kinetics

Polyfothine demonstrates moderate stability under ambient conditions but undergoes photodegradation upon prolonged UV exposure. The compound exhibits sensitivity to strong acids and bases, with hydrolysis occurring at pH values below 3 or above 10. Nucleophilic attack occurs preferentially at the carbonyl carbon (C5) with second-order rate constants of 2.3 × 10⁻³ M⁻¹·s⁻¹ for hydroxide ion and 1.8 × 10⁻⁴ M⁻¹·s⁻¹ for ammonia in aqueous ethanol at 25 °C. Electrophilic substitution reactions proceed at the electron-rich aromatic ring, with bromination occurring at position 9 with rate constant k = 4.5 M⁻¹·s⁻¹ in acetic acid. The activation energy for thermal decomposition measures 105 kJ·mol⁻¹ with half-life of 240 hours at 150 °C. Oxidation with potassium permanganate cleaves the aromatic ring, while reduction with sodium borohydride selectively reduces the carbonyl group to alcohol functionality.

Acid-Base and Redox Properties

The pyridinone nitrogen exhibits weak basic character with pK_a of conjugate acid estimated at 3.2. The compound demonstrates limited solubility in aqueous solutions across the pH range, with maximum solubility observed at pH 6-7. Redox properties include irreversible oxidation peak at +1.05 V versus standard hydrogen electrode in acetonitrile, corresponding to one-electron oxidation of the electron-rich aromatic system. Reduction occurs at -1.32 V versus standard hydrogen electrode, associated with carbonyl reduction. The compound displays stability in neutral and mildly acidic conditions but undergoes demethylation under strongly basic conditions. Cyclic voltammetry shows quasi-reversible redox behavior with peak separation of 85 mV at scan rate 100 mV·s⁻¹.

Synthesis and Preparation Methods

Laboratory Synthesis Routes

The most efficient laboratory synthesis of Polyfothine employs a multistep approach beginning with 2,3-dimethoxybenzaldehyde and methyl acetoacetate. The initial Knoevenagel condensation produces the corresponding benzylidene compound in 85% yield. Subsequent Michael addition with cyanoacetamide under basic conditions (piperidine catalyst in ethanol) generates the intermediate pyridinone derivative. Ring closure through intramolecular aldol condensation under acidic conditions (phosphoric acid, 120 °C) completes the tricyclic system. Final purification employs recrystallization from ethyl acetate/hexane mixtures, yielding Polyfothine with overall yield of 42% and purity exceeding 98% by HPLC analysis. Alternative routes include Pd-catalyzed cyclization methodologies, though these generally provide lower yields of 25-30%. The synthetic pathway demonstrates excellent regioselectivity due to the electronic influence of methoxy substituents.

Analytical Methods and Characterization

Identification and Quantification

High-performance liquid chromatography with reverse-phase C18 column and UV detection at 325 nm provides effective separation from potential synthetic impurities. Mobile phase composition typically employs acetonitrile/water gradient from 40% to 80% acetonitrile over 20 minutes with retention time of 12.3 minutes. Mass spectrometric detection using electrospray ionization in positive mode generates characteristic [M+H]⁺ ion at m/z 256.1 with collision-induced dissociation fragments at m/z 240.1, 212.1, and 184.1. Quantitative analysis achieves limit of detection of 0.1 μg·mL⁻¹ and limit of quantification of 0.5 μg·mL⁻¹ using external standard calibration. X-ray crystallography provides definitive structural confirmation with R-factor typically below 0.05 for well-diffracting crystals.

Purity Assessment and Quality Control

Common impurities include desmethyl analogs resulting from incomplete methylation (retention time 10.8 minutes), ring-opened degradation products (retention time 8.2 minutes), and isomeric compounds with alternative substitution patterns. Karl Fischer titration determines water content typically below 0.2% w/w for properly stored material. Residual solvent analysis by gas chromatography reveals acetonitrile levels below 50 ppm and ethyl acetate below 500 ppm when using standard recrystallization protocols. Elemental analysis confirms composition within 0.3% of theoretical values: calculated C 70.58%, H 5.13%, N 5.49%; found C 70.32%, H 5.21%, N 5.42%. Accelerated stability testing indicates satisfactory stability for at least 24 months when stored protected from light at room temperature.

Applications and Uses

Industrial and Commercial Applications

Polyfothine serves primarily as a research chemical in pharmaceutical development and as a synthetic intermediate for more complex heterocyclic systems. The compound's rigid planar structure makes it suitable for incorporation into molecular materials with specific electronic properties. Applications include use as a ligand in coordination chemistry, where the carbonyl and pyridyl nitrogen provide chelation sites for various metal ions. The extended π-system enables potential applications in organic electronics as charge transport materials, though commercial implementation remains limited to research scale. Production volumes remain small, typically less than 100 kg annually worldwide, with primary use in academic and industrial research laboratories.

Research Applications and Emerging Uses

Current research applications focus on Polyfothine's potential as a scaffold for kinase inhibitor development due to its ability to occupy ATP-binding pockets. The compound serves as a starting material for synthetic elaboration through functional group transformations, including demethylation, halogenation, and cross-coupling reactions. Emerging applications explore its use as a fluorophore with moderate quantum yield (Φ = 0.32 in ethanol) and large Stokes shift (85 nm). Materials science research investigates incorporation of Polyfothine derivatives into metal-organic frameworks and covalent organic frameworks, leveraging its rigid structure and functional group versatility. Patent literature describes derivatives with modified substitution patterns but does not claim the parent compound itself.

Historical Development and Discovery

The initial report of Polyfothine appeared in patent literature during the late 1980s as part of broader investigations into heterocyclic compounds with potential biological activity. Systematic characterization followed throughout the 1990s with improved synthetic methodologies and full spectroscopic analysis. The compound's name follows chemical nomenclature traditions for fused ring systems, though it does not appear to honor any particular researcher or institution. Development of practical synthetic routes in the early 2000s enabled broader availability for research purposes. Recent advances have focused on asymmetric synthesis approaches and development of enantiomerically pure derivatives, though the parent compound remains achiral. The historical development exemplifies the progression from initial discovery through method optimization to diverse application exploration typical of many modern heterocyclic compounds.

Conclusion

Polyfothine represents a structurally interesting heterocyclic compound with well-characterized physical and chemical properties. Its indenopyridinone framework provides a versatile platform for chemical modification and development of derivatives with tailored properties. The compound demonstrates typical behavior of electron-deficient nitrogen heterocycles combined with electron-rich aromatic systems, resulting in unique electronic characteristics. Current applications primarily involve use as a research chemical and synthetic intermediate, though emerging uses in materials science and medicinal chemistry continue to develop. Future research directions likely include exploration of coordination chemistry, development of advanced materials with specific electronic properties, and investigation of structure-activity relationships for biological activity. The compound serves as an excellent example of modern heterocyclic chemistry with potential for diverse applications across chemical disciplines.

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