Properties of C6H13O2B (Pinacolborane):
Alternative NamesHBpin Elemental composition of C6H13O2B
Related compounds
Pinacolborane (C6H13): Chemical CompoundScientific Review Article | Chemistry Reference Series
AbstractPinacolborane, systematically named 4,4,5,5-tetramethyl-1,3,2-dioxaborolane and commonly abbreviated as HBpin, is an organoboron compound with the molecular formula C6H13BO2. This colorless liquid compound features a boron hydride functional group incorporated within a five-membered dioxaborolane ring structure. Pinacolborane exhibits a density of 0.882 g/cm³ and boils at 42-43 °C under reduced pressure of 50 mmHg. The compound demonstrates significant reactivity as a hydroborating agent for alkenes, alkynes, carbonyl compounds, and carboxylic acids. Its principal synthetic utility derives from serving as a precursor to boron-containing reagents used extensively in cross-coupling reactions, C-H activation processes, and materials synthesis. Pinacolborane represents a fundamental reagent in modern organoboron chemistry with applications spanning synthetic methodology development, catalysis research, and specialty chemical manufacturing. IntroductionPinacolborane occupies a central position in contemporary organoboron chemistry as a versatile reagent for introducing boron functionality into organic molecules. Classified as an organometallic compound due to its direct boron-carbon bonds, pinacolborane belongs to the broader family of boronic esters and exhibits characteristic reactivity patterns of boron hydrides. The compound derives its name from the pinacol ligand (2,3-dimethyl-2,3-butanediol) that forms the cyclic ester framework. First reported in the chemical literature during the mid-20th century, pinacolborane has gained prominence primarily through its applications in transition metal-catalyzed borylation reactions and hydroboration processes. The stability imparted by the pinacolato framework, combined with the reactivity of the B-H bond, establishes this compound as a valuable synthetic intermediate with well-defined handling characteristics and predictable transformation pathways. Molecular Structure and BondingMolecular Geometry and Electronic StructurePinacolborane adopts a five-membered heterocyclic structure in which boron serves as the heteroatom within a 1,3,2-dioxaborolane ring system. The molecular geometry approximates an envelope conformation with the boron atom displaced approximately 0.2 Å from the plane defined by the four heavy atoms of the ring. Bond lengths determined by microwave spectroscopy and computational methods indicate B-O distances of 1.36-1.38 Å and C-O distances of 1.43-1.45 Å. The boron center exhibits trigonal planar geometry with O-B-O bond angles of approximately 112° and C-O-B angles near 108°. The boron atom in pinacolborane exists in sp² hybridization with the empty p orbital perpendicular to the molecular plane, contributing to its Lewis acidic character. The methyl groups attached to the carbon atoms adopt staggered conformations relative to the ring system, minimizing steric interactions. Molecular orbital calculations indicate highest occupied molecular orbitals localized on oxygen lone pairs and the boron-hydrogen σ-bond, while the lowest unoccupied molecular orbital resides primarily on the boron atom. Chemical Bonding and Intermolecular ForcesThe bonding in pinacolborane consists of covalent B-O, B-H, C-O, and C-C bonds with bond dissociation energies estimated at 96 kcal/mol for B-O, 90 kcal/mol for B-H, 85 kcal/mol for C-O, and 83 kcal/mol for C-C bonds. The molecule exhibits a dipole moment of 2.1-2.3 Debye oriented along the B-H bond vector with partial negative charge on oxygen atoms and partial positive charge on boron. Intermolecular interactions are dominated by van der Waals forces with minimal hydrogen bonding capability due to the weakly acidic B-H proton. London dispersion forces between methyl groups represent the primary attractive forces in the liquid phase, consistent with the compound's relatively low boiling point. The boron center maintains significant electrophilic character with a computed atomic charge of approximately +0.7, while the oxygen atoms bear partial negative charges of -0.5 to -0.6. This electronic distribution facilitates Lewis acid-base interactions with nucleophiles and coordinates effectively with transition metal catalysts. Physical PropertiesPhase Behavior and Thermodynamic PropertiesPinacolborane presents as a colorless mobile liquid at ambient temperature with a characteristic mild odor. The compound exhibits a density of 0.882 g/cm³ at 20 °C and demonstrates Newtonian flow behavior with viscosity of 0.89 cP at 25 °C. Under reduced pressure of 50 mmHg, pinacolborane boils at 42-43 °C, while its boiling point at atmospheric pressure is approximately 135-140 °C. The melting point occurs at -45 °C with a heat of fusion of 8.2 kJ/mol. Thermodynamic parameters include heat capacity of 298 J/mol·K, enthalpy of vaporization of 38.5 kJ/mol, and entropy of vaporization of 110 J/mol·K. The compound displays a vapor pressure of 12 mmHg at 25 °C and flash point of 25 °C. The surface tension measures 24.5 dyn/cm at 20 °C, and the refractive index is 1.389 at 589 nm. Pinacolborane is miscible with common organic solvents including diethyl ether, tetrahydrofuran, benzene, and hexanes, but demonstrates limited solubility in water (approximately 2.3 g/L at 25 °C). Spectroscopic CharacteristicsInfrared spectroscopy of pinacolborane reveals characteristic absorption bands at 2170 cm⁻¹ (strong, B-H stretch), 1375 cm⁻¹ (medium, B-C stretch), 1150 cm⁻¹ (strong, B-O stretch), and 950 cm⁻¹ (medium, ring deformation). Proton nuclear magnetic resonance spectroscopy shows signals at δ 0.98 ppm (singlet, 12H, CH₃), δ 4.75 ppm (quartet, 1H, B-H, JB-H = 120 Hz), and δ 1.25 ppm (singlet, 2H, CH). Carbon-13 NMR displays resonances at δ 23.5 ppm (CH₃) and δ 82.5 ppm (quaternary C). Boron-11 NMR exhibits a characteristic quartet at δ 28.5 ppm with coupling constant JB-H = 120 Hz. Mass spectrometric analysis shows molecular ion peak at m/z 128 with base peak at m/z 83 corresponding to [C₅H₁₀BO]⁺ fragment. UV-Vis spectroscopy indicates no significant absorption above 200 nm, consistent with the absence of extended conjugation. Chemical Properties and ReactivityReaction Mechanisms and KineticsPinacolborane demonstrates diverse reactivity patterns centered on the boron-hydrogen bond. Hydroboration of alkenes proceeds via concerted four-center transition states with activation energies of 10-15 kcal/mol depending on substrate electronics. Terminal alkenes react with second-order rate constants of approximately 10⁻³ M⁻¹s⁻¹ at 25 °C, while internal alkenes exhibit significantly slower rates. Alkynes undergo hydroboration with rate constants 5-10 times faster than analogous alkenes. Carbonyl compounds react through nucleophilic addition mechanisms with aldehydes demonstrating greater reactivity (k₂ = 10⁻² M⁻¹s⁻¹) than ketones (k₂ = 10⁻³ M⁻¹s⁻¹). Dehydrogenative coupling to form bis(pinacolato)diboron occurs with first-order kinetics and activation energy of 25 kcal/mol when catalyzed by transition metal complexes. Pinacolborane undergoes protodeboronation under strongly acidic conditions with half-life of 30 minutes in 1 M HCl. The compound demonstrates stability in neutral and basic aqueous solutions with hydrolysis half-life exceeding 24 hours at pH 7. Acid-Base and Redox PropertiesPinacolborane exhibits weak Brønsted acidity with pKₐ estimated at 32 in dimethyl sulfoxide, significantly less acidic than catecholborane (pKₐ = 28). The compound functions as a Lewis acid with association constant of 10³ M⁻¹ for triethylamine complex formation. Redox properties include reduction potential of -1.2 V versus saturated calomel electrode for the Bpin/Bpin⁻ couple. Oxidation occurs at +1.8 V versus ferrocene/ferrocenium with formation of boron-centered radicals. Pinacolborane demonstrates stability toward molecular oxygen with half-life of 48 hours in air-saturated solutions, but undergoes rapid hydroperoxide formation upon exposure to singlet oxygen. The compound is incompatible with strong oxidizing agents including peroxides, halogens, and chromium(VI) compounds, resulting in vigorous decomposition. Storage under inert atmosphere maintains stability for extended periods, with less than 5% decomposition observed after 12 months at room temperature. Synthesis and Preparation MethodsLaboratory Synthesis RoutesThe most efficient laboratory synthesis of pinacolborane involves the reaction of pinacol with borane-dimethyl sulfide complex in anhydrous ether solvent. This method proceeds at 0 °C with gradual warming to room temperature over 4 hours, yielding 85-90% purified product after fractional distillation. Alternative routes include hydroboration of 2,3-dimethyl-2-butene with borane-THF complex followed by in situ protection with pinacol, providing 75-80% yield. A third approach utilizes transesterification of trimethyl borate with pinacol in the presence of catalytic sodium hydride, yielding pinacolborane after vacuum distillation. Purification typically employs fractional distillation under reduced pressure (40-50 mmHg) with collection of the 42-43 °C fraction. The compound is typically stored as a 1.0 M solution in hexanes or tetrahydrofuran under nitrogen atmosphere to prevent decomposition. Analytical purity exceeding 99% is achievable through careful distillation and storage techniques. Analytical Methods and CharacterizationIdentification and QuantificationPinacolborane is routinely characterized by 1H NMR spectroscopy through identification of the characteristic quartet at δ 4.75 ppm (JB-H = 120 Hz) corresponding to the boron-bound proton. Quantitative analysis employs gas chromatography with flame ionization detection using a non-polar capillary column (DB-1 or equivalent) with helium carrier gas. Retention time typically occurs at 3.2 minutes under temperature programming from 50 °C to 200 °C at 10 °C/min. Alternative methods include titration with standardized sodium hydroxide solution after hydrolysis to boric acid, though this method lacks specificity. Fourier transform infrared spectroscopy provides qualitative confirmation through the strong B-H stretching absorption at 2170 cm⁻¹. Mass spectrometric detection limit reaches 0.1 μg/mL using electron impact ionization with selected ion monitoring at m/z 128. Karl Fischer titration determines water content with detection limit of 50 ppm, critical for moisture-sensitive applications. Purity Assessment and Quality ControlCommercial pinacolborane typically meets purity specifications of ≥95% with major impurities including bis(pinacolato)diboron (≤3%), pinacol (≤1%), and trace solvents. Quality control protocols employ gas chromatography with internal standardization using n-dodecane as reference. Acceptance criteria require not less than 95% area percent for the main peak and not more than 0.5% for any single impurity. Water content specification is typically ≤100 ppm determined by Karl Fischer coulometric titration. Residual solvents are limited to ≤500 ppm total by gas chromatography with headspace sampling. The compound is assessed for peroxide formation using test strips with acceptable limit of ≤10 ppm. Stability studies indicate that properly stored pinacolborane solutions in anhydrous solvents maintain specification for at least 12 months when kept under inert atmosphere at -20 °C. Visual inspection criteria require a colorless solution free of particulate matter. Applications and UsesIndustrial and Commercial ApplicationsPinacolborane serves as a key intermediate in the manufacture of pharmaceutical compounds, particularly in the synthesis of boronic acid derivatives used as protease inhibitors and enzyme modifiers. The compound finds application in the production of organic light-emitting diodes through preparation of boron-doped charge transport materials. Industrial scale use includes the synthesis of specialty polymers incorporating boron functionalities for electronic applications. Catalytic applications employ pinacolborane as a stoichiometric reducing agent in transfer hydrogenation processes and deoxygenation reactions. The compound functions as a precursor to Suzuki-Miyaura cross-coupling reagents with annual production estimated at 10-20 metric tons worldwide. Major manufacturers produce pinacolborane in batch processes with typical lot sizes of 100-500 kg. Market pricing ranges from $200-500 per kilogram depending on purity and quantity, with demand growing at approximately 8% annually due to expanding applications in synthetic chemistry. Research Applications and Emerging UsesPinacolborane enables numerous research applications in synthetic methodology development, particularly in transition metal-catalyzed C-H borylation reactions where it serves as both boron source and hydride donor. The compound facilitates mechanistic studies of hydroboration processes through its well-defined reactivity and spectroscopic handles. Emerging applications include the development of boron-containing metal-organic frameworks for gas storage and separation, where pinacolborane provides a convenient boron incorporation method. Materials science research utilizes pinacolborane for surface functionalization of nanomaterials and preparation of boron-doped graphene analogues. Catalysis research employs the compound in developing asymmetric hydroboration methodologies using chiral catalysts. Photoredox catalysis applications continue to expand with pinacolborane serving as both reductant and boron source in dual catalytic systems. The compound features in over 500 scientific publications annually, reflecting its fundamental importance in modern chemical research. Historical Development and DiscoveryThe development of pinacolborane parallels advances in organoboron chemistry throughout the 20th century. Early investigations of boron hydrides by Alfred Stock in the 1920s established fundamental principles of boron-hydrogen chemistry. The specific pinacol derivative emerged from systematic studies of boronic ester chemistry conducted by Herbert C. Brown and colleagues during the 1950s-1960s. Brown's pioneering work on hydroboration reactions identified the need for stabilized borane equivalents that would maintain reactivity while offering improved handling characteristics compared to borane itself. The pinacol protecting group strategy was adapted from carbohydrate chemistry where it had been employed to stabilize diol functionalities. Initial reports of pinacolborane appeared in the chemical literature in the late 1960s, with full characterization completed by the early 1970s. The compound gained significant attention following the development of rhodium-catalyzed hydroboration methodologies in the 1980s that exploited its predictable reactivity profile. The subsequent emergence of metal-catalyzed C-H borylation reactions in the 2000s solidified pinacolborane's position as a fundamental reagent in synthetic chemistry. ConclusionPinacolborane represents a structurally simple yet chemically sophisticated organoboron compound with diverse applications in synthetic chemistry. Its five-membered dioxaborolane ring system provides exceptional stability while maintaining sufficient reactivity for numerous transformations. The compound's well-characterized physical properties and predictable reactivity patterns have established it as a reagent of choice for hydroboration processes and boron incorporation methodologies. Pinacolborane continues to enable advances in catalytic methodology development, materials synthesis, and pharmaceutical manufacturing. Future research directions likely include the development of enantioselective transformations using chiral variants, expansion into main group chemistry applications, and utilization in energy-related materials development. The fundamental understanding of structure-reactivity relationships in pinacolborane provides a foundation for designing next-generation boron reagents with tailored properties for specific chemical applications. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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