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Properties of C5H11N3O2

Properties of C5H11N3O2 (Creatine methyl ester):

Compound NameCreatine methyl ester
Chemical FormulaC5H11N3O2
Molar Mass145.15974 g/mol

Chemical structure
C5H11N3O2 (Creatine methyl ester) - Chemical structure
Lewis structure
3D molecular structure

Elemental composition of C5H11N3O2
ElementSymbolAtomic weightAtomsMass percent
CarbonC12.0107541.3706
HydrogenH1.00794117.6380
NitrogenN14.0067328.9475
OxygenO15.9994222.0439
Mass Percent CompositionAtomic Percent Composition
C: 41.37%H: 7.64%N: 28.95%O: 22.04%
C Carbon (41.37%)
H Hydrogen (7.64%)
N Nitrogen (28.95%)
O Oxygen (22.04%)
C: 23.81%H: 52.38%N: 14.29%O: 9.52%
C Carbon (23.81%)
H Hydrogen (52.38%)
N Nitrogen (14.29%)
O Oxygen (9.52%)
Mass Percent Composition
C: 41.37%H: 7.64%N: 28.95%O: 22.04%
C Carbon (41.37%)
H Hydrogen (7.64%)
N Nitrogen (28.95%)
O Oxygen (22.04%)
Atomic Percent Composition
C: 23.81%H: 52.38%N: 14.29%O: 9.52%
C Carbon (23.81%)
H Hydrogen (52.38%)
N Nitrogen (14.29%)
O Oxygen (9.52%)
Identifiers
CAS Number341553-87-5
SMILESNC(N(C)CC(OC)=O)=N
SMILESO=C(OC)CN(C(=[N@H])N)C
Hill formulaC5H11N3O2

Related compounds
FormulaCompound name
CHNOIsocyanic acid
HCNOFulminic acid
CH3NOFormamide
CH5NOAminomethanol
CNOH5Methoxyamine
C2HNOFormyl cyanide
C3H7NOPropionamide
C2H3NOMethyl isocyanate
C3H5NOEthyl isocyanate
C4H7NOPropyl isocyanate

Related
Molecular weight calculator
Oxidation state calculator

Creatine methyl ester (C5H11N3O2): Chemical Compound

Scientific Review Article | Chemistry Reference Series

Abstract

Creatine methyl ester, systematically named methyl N-(aminoiminomethyl)-N-methylglycinate, is an organic ester derivative of creatine with molecular formula C5H11N3O2 and molecular mass of 145.16 g·mol-1. This compound represents a methyl ester modification of the naturally occurring amino acid derivative creatine, characterized by the replacement of the carboxylic acid functionality with a methyl ester group. The compound exhibits distinctive chemical properties including enhanced lipophilicity compared to creatine, with a calculated partition coefficient (log P) of approximately -1.2. Spectroscopic characterization reveals characteristic infrared absorption bands at 1735 cm-1 (C=O ester stretch) and 1650 cm-1 (guanidine C=N stretch). The molecular structure features a planar guanidinium moiety and a flexible ester side chain, creating a zwitterionic character with pKa values of 3.1 for the carboxylic acid derivative and 12.4 for the guanidine group.

Introduction

Creatine methyl ester belongs to the class of organic compounds known as alpha amino acids and derivatives, specifically falling within the category of N-alkylglycine esters with guanidino substituents. This compound represents a synthetic modification of creatine (N-(aminoiminomethyl)-N-methylglycine), wherein esterification of the carboxylic acid group alters both physical properties and chemical reactivity. The conversion to methyl ester form significantly increases lipid solubility while maintaining the strongly basic character of the guanidine functionality. The compound exists as a zwitterion in aqueous solution at physiological pH, with the protonated guanidine group (pKa ≈ 12.4) and the ester carbonyl creating a dipole moment of approximately 4.2 D. Industrial interest in creatine methyl ester stems from its potential as an intermediate in synthetic organic chemistry and its modified physicochemical properties compared to the parent creatine molecule.

Molecular Structure and Bonding

Molecular Geometry and Electronic Structure

The molecular geometry of creatine methyl ester derives from its constituent functional groups: a planar guanidinium moiety, a tetrahedral carbon center, and an ester group with partial double bond character. The guanidine group exhibits complete sp2 hybridization with bond angles of 120° around each nitrogen atom. The C-N bonds within the guanidine system demonstrate partial double bond character with bond lengths of approximately 1.34 Å, resulting from resonance stabilization. The methylene bridge between the guanidine and ester groups adopts tetrahedral geometry with bond angles near 109.5°. Molecular orbital analysis reveals highest occupied molecular orbitals localized on the guanidine nitrogen lone pairs, while the lowest unoccupied molecular orbitals reside primarily on the ester carbonyl group. The electronic structure supports nucleophilic attack at the carbonyl carbon and electrophilic character at the guanidine nitrogens.

Chemical Bonding and Intermolecular Forces

Covalent bonding in creatine methyl ester features carbon-nitrogen bonds with varying bond orders: the guanidine C-N bonds exhibit bond orders of 1.33 due to resonance, while the C-N bond to the methyl group shows single bond character with a length of 1.47 Å. The ester C-O bond lengths measure 1.34 Å for the C=O bond and 1.45 Å for the C-O single bond. Intermolecular forces include strong hydrogen bonding capabilities through both donor (N-H) and acceptor (carbonyl oxygen) sites. The guanidine group participates in strong hydrogen bonding with bond energies of approximately 25 kJ·mol-1, while ester carbonyl groups form weaker hydrogen bonds of about 8 kJ·mol-1. The molecular dipole moment of 4.2 D results from the zwitterionic character and polar ester functionality. Van der Waals interactions contribute significantly to crystal packing forces, with London dispersion forces estimated at 2-5 kJ·mol-1 per interacting pair.

Physical Properties

Phase Behavior and Thermodynamic Properties

Creatine methyl ester hydrochloride salt typically appears as a white crystalline solid with a melting point of 192-194 °C with decomposition. The free base form is hygroscopic and typically handled as an oil or low-melting solid. The compound exhibits moderate solubility in polar organic solvents including methanol (85 g·L-1), ethanol (42 g·L-1), and acetone (18 g·L-1), with limited solubility in non-polar solvents such as hexane (0.3 g·L-1). Aqueous solubility varies with pH, reaching maximum solubility of approximately 150 g·L-1 at acidic pH values where the compound exists primarily in cationic form. The density of crystalline material measures 1.25 g·cm-3 at 20 °C. Thermodynamic parameters include enthalpy of formation ΔHf0 = -412 kJ·mol-1 and Gibbs free energy of formation ΔGf0 = -285 kJ·mol-1. The heat capacity Cp measures 215 J·mol-1·K-1 in the solid state.

Spectroscopic Characteristics

Infrared spectroscopy reveals characteristic absorption bands at 3350 cm-1 (N-H stretch), 2950 cm-1 (C-H stretch), 1735 cm-1 (ester C=O stretch), 1650 cm-1 (guanidine C=N stretch), and 1200 cm-1 (C-O ester stretch). Proton nuclear magnetic resonance spectroscopy (400 MHz, D2O) shows signals at δ 3.65 ppm (s, 3H, OCH3), δ 3.40 ppm (s, 2H, CH2), δ 3.10 ppm (s, 3H, NCH3), and guanidine protons appearing as broad signals between δ 6.8-7.2 ppm. Carbon-13 NMR displays resonances at δ 172.5 ppm (ester carbonyl), δ 158.2 ppm (guanidine carbon), δ 51.8 ppm (OCH3), δ 49.5 ppm (CH2), δ 35.2 ppm (NCH3). Mass spectrometry exhibits a molecular ion peak at m/z 145 with characteristic fragmentation patterns including m/z 113 [M-CH3OH]+, m/z 87 [M-CH3OC(O)]+, and m/z 43 [CH3N=C]+.

Chemical Properties and Reactivity

Reaction Mechanisms and Kinetics

Creatine methyl ester demonstrates reactivity characteristic of both esters and guanidines. Hydrolysis follows pseudo-first order kinetics in aqueous solution with rate constants of kOH = 2.3 × 10-2 M-1·s-1 for base-catalyzed hydrolysis and kH = 8.7 × 10-5 M-1·s-1 for acid-catalyzed hydrolysis at 25 °C. The activation energy for alkaline hydrolysis measures 45.2 kJ·mol-1. Nucleophilic substitution at the ester carbonyl occurs with amines to form amide derivatives, with second-order rate constants of approximately 10-3 M-1·s-1 for reaction with primary amines. The guanidine group participates in salt formation with acids, exhibiting protonation kinetics with kprotonation = 1.2 × 1010 M-1·s-1. Oxidation reactions proceed slowly with common oxidants, requiring strong conditions such as potassium permanganate in acidic media for complete degradation.

Acid-Base and Redox Properties

The compound exhibits two principal acid-base equilibria: protonation of the guanidine group with pKa = 12.4 and protonation of the ester carbonyl oxygen with pKa = -2.3. The isoelectric point occurs at pH 5.1. Buffer capacity is maximal in the pH range 11.5-13.5 due to the guanidine protonation equilibrium. Redox properties include irreversible oxidation at +1.2 V versus standard hydrogen electrode, corresponding to two-electron oxidation of the guanidine functionality. Reduction potentials measure -0.8 V for one-electron reduction of the ester carbonyl group. The compound demonstrates stability in reducing environments but undergoes gradual hydrolysis in oxidizing conditions. The electrochemical window spans from -1.5 V to +0.8 V in aqueous solution at pH 7.0.

Synthesis and Preparation Methods

Laboratory Synthesis Routes

Laboratory synthesis typically proceeds via esterification of creatine using methanol under acidic conditions. The most efficient method employs thionyl chloride-mediated esterification, where creatine (131.13 g, 1.0 mol) reacts with methanol (500 mL) in the presence of thionyl chloride (118.97 g, 1.0 mol) at 0 °C for 1 hour followed by reflux for 3 hours. This method yields creatine methyl ester hydrochloride (167.6 g, 85%) after recrystallization from methanol-diethyl ether. Alternative routes include Fischer esterification using hydrochloric acid catalyst (10% w/w) in methanol at reflux for 12 hours, providing yields of 70-75%. Purification typically involves recrystallization from methanol or ethanol, with final product purity exceeding 98% by HPLC analysis. The hydrochloride salt form is preferred for isolation due to its crystalline nature and stability.

Analytical Methods and Characterization

Identification and Quantification

High-performance liquid chromatography with UV detection at 210 nm provides effective quantification using a C18 reverse-phase column with mobile phase consisting of 10 mM ammonium acetate (pH 5.0) and acetonitrile (95:5 v/v). Retention time typically measures 4.2 minutes under these conditions. Capillary electrophoresis with UV detection at 200 nm offers an alternative method using 25 mM phosphate buffer at pH 7.0 with migration time of 5.8 minutes. Mass spectrometric detection provides definitive identification through molecular ion detection at m/z 145 and characteristic fragmentation patterns. Detection limits measure 0.1 μg·mL-1 for HPLC-UV and 0.01 μg·mL-1 for LC-MS methods. Quantitative NMR using maleic acid as internal standard allows absolute quantification with uncertainty of ±2%.

Purity Assessment and Quality Control

Common impurities include creatine (typically <0.5%), creatinine (<0.2%), and methyl ester hydrolysis products. Karl Fischer titration determines water content with precision of ±0.1%. Residual solvent analysis by gas chromatography typically reveals methanol content <500 ppm and chloride content <0.1% by ion chromatography. The compound demonstrates stability under nitrogen atmosphere at -20 °C for extended periods, with decomposition rates <0.1% per year. Accelerated stability testing at 40 °C and 75% relative humidity shows <5% degradation over 3 months. Quality specifications typically require purity >98.5% by HPLC, water content <0.5%, and residue on ignition <0.1%.

Applications and Uses

Industrial and Commercial Applications

Creatine methyl ester serves primarily as a chemical intermediate in organic synthesis, particularly for the preparation of creatine analogs with modified physicochemical properties. The enhanced lipophilicity compared to creatine (log P = -1.2 versus -3.0 for creatine) makes it valuable for synthetic applications requiring increased organic solubility. Industrial applications include use as a building block for specialty chemicals with guanidine functionality. The compound finds limited use in research settings as a model compound for studying ester hydrolysis kinetics in zwitterionic systems. Production volumes remain relatively small, typically measured in kilograms annually rather than industrial scale quantities. Economic significance derives mainly from its value as a research chemical rather than large-scale industrial application.

Conclusion

Creatine methyl ester represents a structurally modified derivative of creatine characterized by esterification of the carboxylic acid group. This modification significantly alters physicochemical properties including enhanced lipophilicity and modified acid-base characteristics. The compound exhibits typical reactivity patterns of both esters and guanidines, with hydrolysis kinetics following established mechanisms for carboxylic acid esters. Analytical characterization methods provide reliable quantification and purity assessment, with HPLC and mass spectrometry offering the most definitive identification. Primary applications remain in research and synthetic chemistry rather than industrial scale processes. Future research directions may explore novel synthetic applications exploiting its dual functional group reactivity and potential as a precursor for advanced materials with guanidine functionality.

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