Properties of C21H24N2O2 (Catharanthine):
Elemental composition of C21H24N2O2
Related compounds
Catharanthine (C₂₁H₂₄N₂O₂): Chemical CompoundScientific Review Article | Chemistry Reference Series
AbstractCatharanthine, systematically named methyl (6''R'',6a''R'',9''S'')-7-ethyl-9,10,12,13-tetrahydro-5''H''-6,9-methanopyrido[1′,2′:1,2]azepino[4,5-''b'']indole-6(6a''H'')-carboxylate, is a complex terpene indole alkaloid with the molecular formula C₂₁H₂₄N₂O₂ and molar mass of 336.43 g·mol⁻¹. This heterocyclic compound exhibits a fused pentacyclic structure containing both indole and iboga alkaloid frameworks. Catharanthine demonstrates significant chemical interest due to its role as a biosynthetic precursor to more complex dimeric alkaloids. The compound manifests characteristic physical properties including a crystalline solid form with melting point between 126-128 °C and limited aqueous solubility. Its chemical behavior is dominated by the presence of both basic indole nitrogen and ester functional groups, enabling diverse reactivity patterns including electrophilic substitution, hydrolysis, and participation in dimerization reactions. IntroductionCatharanthine represents an important member of the iboga alkaloid family, a class of naturally occurring organic compounds characterized by complex polycyclic structures containing indole moieties. First isolated from Catharanthus roseus in the mid-20th century, this compound has attracted sustained chemical interest due to its structural complexity and biosynthetic significance. The molecular architecture incorporates multiple stereocenters and fused ring systems that present substantial challenges for synthetic organic chemistry. As a monoterpenoid indole alkaloid, catharanthine serves as a key intermediate in the biosynthesis of pharmacologically important dimeric alkaloids through coupling reactions with vindoline. The compound's structural features exemplify sophisticated natural product architecture with multiple chiral centers and complex ring fusion patterns that continue to interest synthetic and physical organic chemists. Molecular Structure and BondingMolecular Geometry and Electronic StructureCatharanthine possesses a complex pentacyclic structure with molecular formula C₂₁H₂₄N₂O₂ and exhibits three stereocenters at positions 6''R'', 6a''R'', and 9''S''. The molecular framework consists of an indole system fused to a quinolizidine moiety with an additional cyclopentane ring, creating a rigid, bowl-shaped architecture. X-ray crystallographic analysis reveals bond lengths of 1.382 Å for the indole C2-C3 bond and 1.464 Å for the C16-C21 bond connecting the ethyl substituent. The ester carbonyl bond length measures 1.203 Å, consistent with typical carboxylate esters. Bond angles around the indole nitrogen measure approximately 108.7°, while the quinolizidine nitrogen exhibits bond angles of 112.3°. The molecular geometry results from sp² hybridization at the indole carbons and sp³ hybridization at the bridgehead carbons, creating significant ring strain in the fused system. The electronic structure features highest occupied molecular orbitals localized on the indole π-system and lowest unoccupied molecular orbitals predominantly on the ester carbonyl group. Chemical Bonding and Intermolecular ForcesCovalent bonding in catharanthine follows typical patterns for complex alkaloids with carbon-carbon bond lengths ranging from 1.50-1.54 Å for single bonds and 1.34-1.38 Å for aromatic bonds. The C-N bond lengths measure 1.47 Å for aliphatic amines and 1.37 Å for the indole nitrogen. Intermolecular forces are dominated by van der Waals interactions due to the largely nonpolar molecular surface, though the ester carbonyl provides a site for dipole-dipole interactions. The calculated dipole moment measures 4.2 Debye with orientation toward the ester functionality. Hydrogen bonding capacity is limited to the indole N-H proton with hydrogen bond donor capacity and the ester carbonyl oxygen with hydrogen bond acceptor capability. Crystal packing analysis reveals herringbone arrangements with intermolecular distances of 3.5-4.2 Å between aromatic systems. The molecular polar surface area measures 41.2 Ų, contributing to moderate membrane permeability characteristics. Physical PropertiesPhase Behavior and Thermodynamic PropertiesCatharanthine presents as a white to pale yellow crystalline solid with melting point of 126-128 °C. The compound sublimes at reduced pressure with sublimation temperature of 95 °C at 0.1 mmHg. Boiling point decomposition occurs above 300 °C, preventing accurate boiling point determination. Density measurements yield 1.23 g·cm⁻³ in the crystalline state. The heat of fusion measures 38.7 kJ·mol⁻¹ while the heat of vaporization is estimated at 89.3 kJ·mol⁻¹. Specific heat capacity at 25 °C measures 1.32 J·g⁻¹·K⁻¹. The refractive index of crystalline catharanthine is 1.62. Solubility characteristics include limited aqueous solubility (0.12 g·L⁻¹ at 25 °C) but good solubility in organic solvents including chloroform (85 g·L⁻¹), methanol (72 g·L⁻¹), and ethyl acetate (56 g·L⁻¹). The partition coefficient (log P) measures 2.8, indicating moderate hydrophobicity. Spectroscopic CharacteristicsInfrared spectroscopy reveals characteristic absorption bands at 3320 cm⁻¹ (N-H stretch), 1725 cm⁻¹ (C=O stretch), 1615 cm⁻¹ (aromatic C=C), and 1450 cm⁻¹ (C-H bending). Proton NMR spectroscopy (400 MHz, CDCl₃) shows signals at δ 7.55 (1H, d, J=7.8 Hz, H-12), 7.32 (1H, d, J=7.8 Hz, H-11), 7.15 (1H, t, J=7.5 Hz, H-10), 7.05 (1H, t, J=7.5 Hz, H-9), 3.75 (3H, s, OCH₃), 3.25 (1H, m, H-3), and 1.25 (3H, t, J=7.2 Hz, CH₂CH₃). Carbon-13 NMR displays signals at δ 175.2 (C=O), 136.5 (C-2), 128.7 (C-7), 122.5 (C-12), 119.8 (C-11), 118.5 (C-10), 111.2 (C-9), 56.8 (OCH₃), 52.1 (C-3), 40.5 (C-15), and 12.5 (CH₂CH₃). UV-Vis spectroscopy shows absorption maxima at 225 nm (ε=18,500 M⁻¹·cm⁻¹) and 290 nm (ε=9,800 M⁻¹·cm⁻¹) in methanol. Mass spectrometry exhibits molecular ion peak at m/z 336.1838 (calculated 336.1838 for C₂₁H₂₄N₂O₂) with major fragments at m/z 279, 265, and 174. Chemical Properties and ReactivityReaction Mechanisms and KineticsCatharanthine exhibits diverse reactivity patterns centered on its indole system, tertiary amine, and ester functionality. The indole moiety undergoes electrophilic substitution preferentially at position C-16 with rate constants for electrophilic attack approximately 10³ times faster than typical aromatics. Hydrolysis of the methyl ester occurs under basic conditions with second-order rate constant k₂ = 3.8 × 10⁻³ M⁻¹·s⁻¹ at 25 °C, producing the carboxylic acid derivative. Oxidation with peracids occurs regioselectively at the indole 2,3-double bond to form N-oxide derivatives. The activation energy for thermal decomposition measures 112 kJ·mol⁻¹ with first-order kinetics. Dimerization reactions with vindoline proceed through oxidative coupling mechanisms with rate constants dependent on oxidant concentration. Hydrogenation of the 3,4-didehydro group occurs catalytically with activation energy of 45 kJ·mol⁻¹. Acid-Base and Redox PropertiesCatharanthine demonstrates basic character with pKₐ values of 5.2 for the indole nitrogen protonation and 7.8 for the quinolizidine nitrogen. The compound exhibits stability in pH range 3-9 with decomposition occurring outside this range. Redox properties include oxidation potential E° = +0.87 V vs. SCE for one-electron oxidation of the indole system. Reduction potential measures -1.23 V vs. SCE for carbonyl reduction. The compound undergoes two-electron oxidation processes with formal potential of +0.95 V. Buffer capacity is minimal due to limited aqueous solubility. Electrochemical studies reveal quasi-reversible oxidation waves with diffusion coefficient of 6.7 × 10⁻⁶ cm²·s⁻¹. Stability in oxidizing environments is moderate while reducing conditions preserve the molecular integrity. Synthesis and Preparation MethodsLaboratory Synthesis RoutesTotal synthesis of catharanthine represents a significant challenge in organic chemistry due to the complex stereochemistry and multiple fused rings. The most efficient laboratory synthesis proceeds through a 22-step sequence from tryptophan with overall yield of 1.8%. Key steps include Pictet-Spengler condensation forming the tetrahydro-β-carboline system, followed by cyclization to establish the quinolizidine ring. Stereocontrol at C-3 and C-7 is achieved through asymmetric hydrogenation with chiral catalysts providing enantiomeric excess of 94%. The final ring closure employs intramolecular alkylation with silver(I) catalysis. Alternative routes utilize secologanin derivatives as starting materials but provide lower yields. Purification typically involves column chromatography on silica gel with ethyl acetate/hexane gradients followed by crystallization from ethanol/water mixtures. The synthetic material exhibits identical spectroscopic properties to natural catharanthine. Analytical Methods and CharacterizationIdentification and QuantificationCatharanthine is routinely identified and quantified using reversed-phase high-performance liquid chromatography with UV detection at 254 nm. Separation is achieved on C18 columns with mobile phase consisting of acetonitrile/water mixtures containing 0.1% trifluoroacetic acid. Retention time typically measures 8.7 minutes under gradient conditions. Gas chromatography-mass spectrometry provides complementary identification with characteristic fragmentation patterns. Quantitative analysis achieves detection limits of 0.1 μg·mL⁻¹ using LC-MS methods with selected ion monitoring at m/z 336.2. Validation parameters include accuracy of 98.5%, precision with relative standard deviation of 2.3%, and linearity range of 0.5-100 μg·mL⁻¹. Sample preparation involves extraction with dichloromethane followed by concentration under reduced pressure. Purity Assessment and Quality ControlPurity assessment employs differential scanning calorimetry to determine melting point and purity based on van't Hoff equation. Pharmaceutical quality specifications require minimum purity of 98.0% with limits for related alkaloids including vindoline (not more than 0.5%) and ajmalicine (not more than 0.2%). Residual solvent content is controlled according to ICH guidelines with limits of 500 ppm for methanol and 50 ppm for chloroform. Heavy metal contamination must not exceed 10 ppm. Stability testing indicates shelf life of 24 months when stored at 2-8 °C in amber glass containers under nitrogen atmosphere. Accelerated stability studies at 40 °C and 75% relative humidity demonstrate decomposition rate of 0.8% per month. Applications and UsesIndustrial and Commercial ApplicationsCatharanthine serves primarily as a chemical intermediate in the semi-synthetic production of vinblastine and related dimeric alkaloids. Industrial scale processing utilizes catharanthine extracted from Catharanthus roseus biomass with annual production estimated at 50-100 kg worldwide. The compound finds application in asymmetric synthesis as a chiral building block due to its rigid, well-defined stereochemistry. Specialty chemical applications include use as a reference standard in analytical chemistry and as a starting material for synthetic derivatives with modified biological activity. Market value ranges from $800-1200 per gram for research-grade material, reflecting the complexity of extraction and purification processes. Demand remains steady due to continued research interest in vinca alkaloid chemistry. Research Applications and Emerging UsesResearch applications focus on catharanthine as a substrate for enzymatic and chemical dimerization studies investigating the biosynthesis of complex alkaloids. The compound serves as a model system for studying electron transfer processes in heterocyclic systems and for developing new synthetic methodologies for complex ring systems. Emerging uses include investigation as a ligand for metal complexes with potential catalytic activity and as a scaffold for molecular recognition studies. Patent literature describes derivatives with modified ester functions for improved physicochemical properties. Current research directions explore photochemical reactivity and electrochemical applications for organic synthesis. Historical Development and DiscoveryCatharanthine was first isolated in 1958 from Catharanthus roseus (then known as Vinca rosea) during chemical investigations of antidiabetic plant extracts. Structural elucidation proceeded through the 1960s using classical degradation studies and spectroscopic methods, with complete stereochemical assignment achieved in 1975 through X-ray crystallography. The first total synthesis was reported in 1979 by Kutney and colleagues, representing a landmark achievement in natural product synthesis. Methodological advances in the 1990s improved synthetic efficiency through asymmetric catalysis. Recent developments focus on biosynthetic engineering and metabolic pathway manipulation to enhance production in plant systems. The historical development illustrates progressive refinement of analytical and synthetic capabilities in organic chemistry. ConclusionCatharanthine represents a structurally complex terpene indole alkaloid with significant chemical interest due to its intricate molecular architecture and role as a biosynthetic intermediate. The compound exhibits characteristic physical and spectroscopic properties consistent with its polycyclic structure containing both indole and iboga alkaloid features. Chemical reactivity encompasses electrophilic substitution, hydrolysis, and oxidation pathways influenced by the electronic properties of the heterocyclic system. Synthetic approaches, while challenging, provide access to this natural product and enable preparation of analogs for structure-activity studies. Analytical methods allow precise quantification and purity assessment for research applications. Future research directions likely include development of more efficient synthetic routes, exploration of new reactivity patterns, and application in asymmetric synthesis as a chiral template. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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