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Properties of Histamine

Properties of Histamine (C5H9N3):

Compound NameHistamine
Chemical FormulaC5H9N3
Molar Mass111.14506 g/mol

Chemical structure
C5H9N3 (Histamine) - Chemical structure
Lewis structure
3D molecular structure
Physical properties
Solubilityeasily soluble
Melting83.50 °C
Helium -270.973
Hafnium carbide 3958
Boiling209.50 °C
Helium -268.928
Tungsten carbide 6000

Alternative Names

2-(1''H''-Imidazol-4-yl)ethanamine

Elemental composition of C5H9N3
ElementSymbolAtomic weightAtomsMass percent
CarbonC12.0107554.0316
HydrogenH1.0079498.1618
NitrogenN14.0067337.8065
Mass Percent CompositionAtomic Percent Composition
C: 54.03%H: 8.16%N: 37.81%
C Carbon (54.03%)
H Hydrogen (8.16%)
N Nitrogen (37.81%)
C: 29.41%H: 52.94%N: 17.65%
C Carbon (29.41%)
H Hydrogen (52.94%)
N Nitrogen (17.65%)
Mass Percent Composition
C: 54.03%H: 8.16%N: 37.81%
C Carbon (54.03%)
H Hydrogen (8.16%)
N Nitrogen (37.81%)
Atomic Percent Composition
C: 29.41%H: 52.94%N: 17.65%
C Carbon (29.41%)
H Hydrogen (52.94%)
N Nitrogen (17.65%)
Identifiers
CAS Number51-45-6
SMILESNCCc1c[nH]cn1
Hill formulaC5H9N3

Related compounds
FormulaCompound name
HNCHydrogen isocyanide
HCNHydrogen cyanide
CH5NMethylamine
CNH3Methylene imine
C3HNCyanoacetylene
CHN5Pentazine
NH4CNAmmonium cyanide
C5H5NPyridine
C2H3NAcetonitrile
C3H3NAcrylonitrile

Related
Molecular weight calculator
Oxidation state calculator

Histamine (C₅H₉N₃): Chemical Compound

Scientific Review Article | Chemistry Reference Series

Abstract

Histamine (2-(1H-imidazol-4-yl)ethanamine, C₅H₉N₃) is a heterocyclic biogenic amine derived from the decarboxylation of the amino acid L-histidine. This nitrogen-containing compound exhibits distinctive chemical properties due to its imidazole ring and ethylamine side chain. Histamine crystallizes as a white hygroscopic solid with a melting point of 83.5°C and boiling point of 209.5°C. The molecule demonstrates amphoteric character with two basic centers: the aliphatic amino group (pKa = 9.75) and the imidazole nitrogen (pKa = 6.04). In aqueous solution, histamine exists predominantly as a monocation with protonation occurring at the aliphatic amino group under physiological conditions. The compound exhibits tautomerism between Nτ-H and Nπ-H forms, with the tele-tautomer being thermodynamically favored. Histamine serves as a fundamental building block in medicinal chemistry and represents an important model system for studying heterocyclic amine behavior.

Introduction

Histamine (C₅H₉N₃) constitutes an important class of organic nitrogen compounds characterized by an imidazole heterocycle linked to an ethylamine chain. First isolated and characterized in 1910 by Dale and Laidlaw, who initially termed it β-imidazolylethylamine, the compound received its current name from the combination of "histo-" (tissue) and "amine" reflecting its biological origins. As a low molecular weight organic compound (111.15 g/mol), histamine displays significant water solubility and hygroscopic properties. The compound belongs to the imidazole class of heterocyclic amines and serves as a prototype for understanding the chemical behavior of similar biological amines. Its structural features make it particularly interesting for studying tautomerism, acid-base properties, and molecular recognition phenomena in chemical systems.

Molecular Structure and Bonding

Molecular Geometry and Electronic Structure

Histamine possesses a planar imidazole ring system connected to a flexible ethylamine side chain. The imidazole ring exhibits aromatic character with six π electrons delocalized across the five-membered heterocycle. Bond lengths within the ring system measure approximately 1.37 Å for C-N bonds and 1.32 Å for C=C bonds, consistent with typical imidazole derivatives. The ethylamine chain adopts a gauche conformation relative to the imidazole ring in the preferred molecular configuration. Molecular orbital analysis reveals highest occupied molecular orbitals localized primarily on the nitrogen atoms, with the lowest unoccupied molecular orbitals distributed across the π system of the heterocycle. The nitrogen atoms display sp² hybridization, with the imidazole ring maintaining approximate C₂v symmetry. Bond angles within the ring measure approximately 110° at carbon atoms and 108° at nitrogen atoms, consistent with the geometric constraints of five-membered heterocycles.

Chemical Bonding and Intermolecular Forces

Histamine engages in multiple types of chemical bonding and intermolecular interactions. Covalent bonding within the molecule follows typical patterns for organic compounds, with C-C bond lengths of 1.54 Å in the ethylamine chain and C-N bond lengths of 1.47 Å connecting the chain to the heterocycle. The compound exhibits significant hydrogen bonding capacity through both nitrogen atoms of the imidazole ring and the amino group. Intermolecular forces include strong hydrogen bonding with donor-acceptor capabilities, particularly in solid-state structures where molecules form extensive networks through N-H···N interactions. The dipole moment measures approximately 3.5 D, oriented along the long axis of the molecule. London dispersion forces contribute significantly to crystal packing, while cation-π interactions become relevant in protonated forms. The molecule demonstrates capacity for both charge-transfer and π-π stacking interactions due to its aromatic character and basic properties.

Physical Properties

Phase Behavior and Thermodynamic Properties

Histamine base exists as a crystalline solid at room temperature with a characteristic melting point of 83.5°C. The compound sublimes at reduced pressure with sublimation beginning at approximately 70°C. The boiling point at atmospheric pressure measures 209.5°C, though decomposition may occur near this temperature. Histamine hydrochloride salt melts at 254°C with decomposition. The density of crystalline histamine measures 1.23 g/cm³ at 20°C. Thermodynamic parameters include enthalpy of formation ΔHf° = -58.3 kJ/mol, entropy S° = 218 J/mol·K, and heat capacity Cp = 192 J/mol·K at 25°C. The compound exhibits high solubility in polar solvents including water (greater than 100 g/100mL), methanol (85 g/100mL), and ethanol (65 g/100mL), but limited solubility in nonpolar solvents such as diethyl ether (less than 0.1 g/100mL). The log P value of -0.7 indicates moderate hydrophilicity consistent with its amine functionality.

Spectroscopic Characteristics

Infrared spectroscopy of histamine reveals characteristic absorption bands at 3400 cm⁻¹ (N-H stretch), 2920 cm⁻¹ (C-H stretch), 1610 cm⁻¹ (C=C/C=N stretch), and 1510 cm⁻¹ (N-H bend). Proton NMR spectroscopy in D₂O shows signals at δ 7.75 ppm (1H, s, H-2), δ 7.05 ppm (1H, s, H-5), δ 3.25 ppm (2H, t, CH₂N), and δ 2.85 ppm (2H, t, CH₂C) with coupling constant J = 7.2 Hz between methylene groups. Carbon-13 NMR displays signals at δ 135.2 ppm (C-2), δ 129.5 ppm (C-5), δ 117.8 ppm (C-4), δ 41.5 ppm (CH₂N), and δ 27.8 ppm (CH₂C). UV-Vis spectroscopy shows absorption maxima at 208 nm (ε = 5800 M⁻¹cm⁻¹) and 268 nm (ε = 2100 M⁻¹cm⁻¹) corresponding to π→π* transitions of the imidazole ring. Mass spectral analysis exhibits molecular ion peak at m/z 111 with major fragmentation peaks at m/z 94 (loss of NH₃), m/z 82 (ring cleavage), and m/z 68 (imidazole ring).

Chemical Properties and Reactivity

Reaction Mechanisms and Kinetics

Histamine demonstrates characteristic reactivity patterns of both aliphatic amines and heterocyclic compounds. The aliphatic amino group undergoes typical amine reactions including acylation, alkylation, and Schiff base formation. Acylation with acetic anhydride proceeds with second-order kinetics (k = 2.3 × 10⁻³ M⁻¹s⁻¹ at 25°C) to form the corresponding amide. The imidazole ring participates in electrophilic substitution reactions, with bromination occurring preferentially at position 2 of the ring. Oxidation with hydrogen peroxide proceeds slowly to form imidazole-4-acetic acid. Stability studies indicate decomposition rates of less than 1% per month when stored at -20°C under nitrogen atmosphere. Thermal decomposition begins at approximately 150°C with elimination of ammonia as the primary degradation pathway. The compound demonstrates moderate stability in aqueous solution with hydrolysis half-life exceeding 30 days at pH 7 and 25°C.

Acid-Base and Redox Properties

Histamine exhibits diprotic basic character with two ionization constants. The imidazole nitrogen protonates with pKa = 6.04, while the aliphatic amino group protonates with pKa = 9.75. The isoelectric point occurs at pH 7.90. The compound forms stable crystalline salts with mineral acids including hydrochloride, hydrobromide, and phosphate derivatives. Redox properties include oxidation potential E° = +0.85 V versus standard hydrogen electrode for one-electron oxidation. The molecule demonstrates stability toward reduction with reduction potential E° = -1.2 V for imidazole ring reduction. Buffer capacity is maximal in the pH range 5.0-7.0 due to the imidazole group's protonation equilibrium. The compound maintains stability across pH range 4-9 with decomposition accelerating outside this range.

Synthesis and Preparation Methods

Laboratory Synthesis Routes

Several synthetic pathways exist for histamine preparation in laboratory settings. The most direct method involves decarboxylation of L-histidine using histidine decarboxylase enzyme or chemical decarboxylating agents. Chemical decarboxylation proceeds via formation of the histidine Schiff base with pyridoxal phosphate followed by decarboxylation at elevated temperature. Alternative synthetic routes include condensation of 4-imidazolecarboxaldehyde with nitroethane followed by reduction of the resulting nitroalkene. This method provides overall yields of 45-50% after purification. Another approach utilizes ring synthesis from appropriately functionalized precursors, such as reaction of 1,2-diaminoethane with formamide under high temperature conditions. Laboratory-scale purification typically employs recrystallization from ethanol/ether mixtures or chromatography on silica gel with methanol/ammonia mobile phases. The final product purity exceeds 99% as determined by HPLC analysis.

Analytical Methods and Characterization

Identification and Quantification

Multiple analytical techniques enable precise identification and quantification of histamine. High-performance liquid chromatography with UV detection at 210 nm provides detection limits of 0.1 μg/mL using reverse-phase C18 columns with phosphate buffer/acetonitrile mobile phases. Gas chromatography-mass spectrometry offers superior specificity with selected ion monitoring at m/z 111, 94, and 82 providing detection limits below 10 ng/mL after derivatization with trifluoroacetic anhydride. Capillary electrophoresis with UV detection achieves separation from related imidazole compounds with resolution greater than 2.0. Spectrofluorometric methods utilizing o-phthaldialdehyde derivatization provide sensitive detection with limits of 5 nM in biological matrices. Chemical tests include formation of orange-red complexes with diazotized sulfanilic acid under alkaline conditions.

Purity Assessment and Quality Control

Pharmaceutical-grade histamine meets purity specifications requiring not less than 98.5% and not more than 101.0% of C₅H₉N₃ on dried basis. Common impurities include imidazole-4-acetic acid (not more than 0.5%), histidine (not more than 0.3%), and 1-methylhistamine (not more than 0.2%). Water content by Karl Fischer titration must not exceed 0.5%. Residue on ignition remains below 0.1%. Heavy metal contamination limits are set at 10 ppm maximum. Chromatographic purity testing requires that no single impurity exceeds 0.5% and total impurities remain below 1.5%. Stability indicating methods demonstrate specificity toward degradation products including oxidation products and decomposition compounds. Storage conditions recommend protection from light and moisture at temperatures not exceeding 25°C.

Applications and Uses

Industrial and Commercial Applications

Histamine serves primarily as a chemical intermediate in pharmaceutical manufacturing and research applications. The compound finds use as a building block for synthesis of more complex molecules containing imidazole functionality. In analytical chemistry, histamine functions as a standard for calibration of instruments and validation of methods for amine detection. The compound has limited direct industrial application due to its biological activity but finds niche use in specialized chemical processes. Production volumes remain relatively small with global production estimated at 10-20 metric tons annually. Major manufacturers operate under strict regulatory controls due to the compound's pharmacological properties. Cost analysis indicates prices ranging from $200-500 per gram for research-grade material, with bulk quantities available at reduced rates.

Research Applications and Emerging Uses

In chemical research, histamine serves as a model compound for studying heterocyclic amine behavior, tautomerism, and molecular recognition phenomena. The molecule represents an important ligand for coordination chemistry with transition metals, forming complexes with interesting magnetic and spectroscopic properties. Recent investigations explore histamine derivatives as components in supramolecular chemistry and molecular self-assembly systems. Emerging applications include use as a template for molecular imprinting polymers designed for amine recognition. The compound's structural features make it valuable for fundamental studies of hydrogen bonding networks and proton transfer reactions. Research continues into modified histamine derivatives with enhanced stability or altered electronic properties for specialized applications in materials science.

Historical Development and Discovery

The isolation and characterization of histamine represents a significant achievement in early 20th century chemistry. British pharmacologists Henry Hallett Dale and Patrick Playfair Laidlaw first described the compound's physiological effects in 1910 while working at the Wellcome Physiological Research Laboratories. Their systematic investigation of tissue extracts led to identification of what they initially termed "β-imidazolylethylamine." The name "histamine" emerged by 1913, derived from the Greek "histos" (tissue) and "amine," reflecting its origin from biological tissues. Early chemical work established the compound's structure as 4-(2-aminoethyl)imidazole through degradation studies and synthetic confirmation. The 1920s saw development of practical synthetic routes, notably the decarboxylation of histidine, which enabled larger-scale production for research purposes. Throughout the mid-20th century, investigation focused on the compound's chemical properties and reactions, with particular attention to its tautomeric behavior and acid-base characteristics. Modern chemical understanding benefits from advanced spectroscopic and computational methods that have elucidated detailed structural and electronic properties.

Conclusion

Histamine stands as a chemically intriguing heterocyclic amine with distinctive structural features and reactivity patterns. Its imidazole ring system connected to an ethylamine side chain creates a molecule with unique electronic properties and amphoteric character. The compound's tautomeric behavior, acid-base properties, and hydrogen bonding capacity make it a valuable model system for fundamental chemical studies. While primarily known for its biological significance, histamine possesses intrinsic chemical interest due to its structural features and synthetic accessibility. Current understanding of its molecular properties provides a foundation for further investigation into modified derivatives and analogous compounds. Future research directions may explore histamine's potential in materials science applications, particularly in supramolecular chemistry and molecular recognition systems. The compound continues to offer opportunities for fundamental studies of heterocyclic amine chemistry and molecular interactions.

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