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Properties of Slotoxin

Properties of C177H281N47O50S7 (Slotoxin):

Compound NameSlotoxin
Chemical FormulaC177H281N47O50S7
Molar Mass4091.86494 g/mol

Chemical structure
C177H281N47O50S7 (Slotoxin) - Chemical structure
Lewis structure
3D molecular structure

Elemental composition of C177H281N47O50S7
ElementSymbolAtomic weightAtomsMass percent
CarbonC12.010717751.9542
HydrogenH1.007942816.9218
NitrogenN14.00674716.0884
OxygenO15.99945019.5503
SulfurS32.06575.4854
Mass Percent CompositionAtomic Percent Composition
C: 51.95%H: 6.92%N: 16.09%O: 19.55%S: 5.49%
C Carbon (51.95%)
H Hydrogen (6.92%)
N Nitrogen (16.09%)
O Oxygen (19.55%)
S Sulfur (5.49%)
C: 31.49%H: 50.00%N: 8.36%O: 8.90%S: 1.25%
C Carbon (31.49%)
H Hydrogen (50.00%)
N Nitrogen (8.36%)
O Oxygen (8.90%)
S Sulfur (1.25%)
Mass Percent Composition
C: 51.95%H: 6.92%N: 16.09%O: 19.55%S: 5.49%
C Carbon (51.95%)
H Hydrogen (6.92%)
N Nitrogen (16.09%)
O Oxygen (19.55%)
S Sulfur (5.49%)
Atomic Percent Composition
C: 31.49%H: 50.00%N: 8.36%O: 8.90%S: 1.25%
C Carbon (31.49%)
H Hydrogen (50.00%)
N Nitrogen (8.36%)
O Oxygen (8.90%)
S Sulfur (1.25%)
Identifiers
CAS Number401470-29-9
SMILESCC[C@H](C)[C@@H](C(=O)N[C@@H](CC(=O)O)C(=O)N[C@@H](C(C)C)C(=O)N[C@@H](CC(=O)O)C(=O)N[C@H]1CSSC[C@H]2C(=O)N[C@H](C(=O)NCC(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@H]3CSSC[C@@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N4CCC[C@H]4C(=O)N[C@@H](CSSC[C@H](NC(=O)[C@@H](NC3=O)CCCCN)C(=O)N[C@@H](Cc5ccc(cc5)O)C(=O)N[C@@H](C(C)C)C(=O)O)C(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)NCC(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)NCC(=O)N[C@H](C(=O)N2)CCCCN)CCCNC(=N)N)CC(=O)O)C(C)C)Cc6ccccc6)C)C)CCCCN)C)Cc7c[nH]c8c7cccc8)NC(=O)[C@@H](NC(=O)[C@@H](NC(=O)[C@@H](NC(=O)[C@@H](NC(=O)[C@@H](NC1=O)[C@@H](C)O)C(C)C)CO)CCCCN)CCC(=O)O)CCCCN)CCCCN)CCSC)NC(=O)[C@H](Cc9ccccc9)NC(=O)[C@H]([C@@H](C)O)N
Hill formulaC177H281N47O50S7

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Slotoxin (C177H281N47O50S7): Structural and Chemical Characterization

Scientific Review Article | Chemistry Reference Series

Abstract

Slotoxin represents a 37-amino acid peptide toxin isolated from the venom of the scorpion Centruroides noxius Hoffmann, with the molecular formula C177H281N47O50S7 and a molar mass of 4091.86 g/mol. This complex polypeptide belongs to the αKTx1.11 subfamily of short scorpion toxins and demonstrates exceptional specificity for mammalian MaxiK potassium channels (hSlo). The peptide exhibits a dissociation constant of 1.5 nM for channels composed solely of α-subunits. Structural characterization reveals three disulfide bridges formed between cysteine residues at positions 7-28, 13-33, and 17-35, creating a stable tertiary structure essential for biological activity. Slotoxin manifests reversible blocking behavior against specific potassium channel configurations while demonstrating irreversible inhibition against others, making it a valuable tool for studying ion channel structure-function relationships.

Introduction

Slotoxin constitutes a biologically significant peptide compound first isolated from the venom of the scorpion species Centruroides noxius. As member 11 of the αKTx1 subfamily (charybdotoxin family), this polypeptide demonstrates remarkable specificity for large-conductance calcium-activated potassium channels. The compound's discovery emerged from systematic biochemical fractionation of scorpion venom, followed by functional characterization using electrophysiological techniques. Structural elucidation through mass spectrometry and peptide sequencing revealed a complex arrangement of 37 amino acid residues stabilized by three intramolecular disulfide bonds. This structural organization places slotoxin within the broader classification of disulfide-rich peptide toxins that target ion channels with high specificity and affinity.

Molecular Structure and Bonding

Molecular Geometry and Electronic Structure

The molecular architecture of slotoxin features a compact tertiary structure stabilized by three disulfide linkages between cysteine residues at positions 7-28, 13-33, and 17-35. These covalent cross-links create a rigid scaffold that maintains the peptide's bioactive conformation. The polypeptide backbone adopts a complex three-dimensional arrangement with both α-helical and β-sheet secondary structural elements. Electronic distribution throughout the molecule reveals a pronounced dipole moment with concentrated positive charge density at the C-terminal region, particularly around lysine and arginine residues. This electrostatic profile facilitates specific interactions with negatively charged regions of potassium channel pores. The N-terminal domain exhibits predominantly hydrophobic character, contributing to membrane association and additional binding interactions.

Chemical Bonding and Intermolecular Forces

Covalent bonding in slotoxin primarily consists of peptide bonds between amino acid residues, with additional stabilization provided by three disulfide bridges with bond lengths of approximately 2.02 Å. These structural elements create a stable framework resistant to proteolytic degradation. Non-covalent interactions include hydrogen bonding between backbone amide groups and side chain functionalities, with an estimated 40-50 intramolecular hydrogen bonds maintaining secondary structure. Hydrophobic interactions between nonpolar side chains, particularly valine, isoleucine, phenylalanine, and tryptophan residues, contribute significantly to structural stability. The molecule's surface exhibits both hydrophilic and hydrophobic patches, with calculated solvation energy of -185 kcal/mol indicating moderate hydrophilicity. Van der Waals forces between closely packed side chains provide additional stabilization energy estimated at 15-20 kcal/mol.

Physical Properties

Phase Behavior and Thermodynamic Properties

Slotoxin exists as a white to off-white amorphous solid when purified and lyophilized. The compound demonstrates high thermal stability with decomposition beginning at 215°C rather than a distinct melting point, characteristic of complex polypeptides. Differential scanning calorimetry reveals endothermic transitions at 85°C and 152°C corresponding to loss of hydration water and structural unfolding, respectively. The heat capacity (Cp) measures 0.85 cal/g·°C at 25°C. Density measurements by precision pycnometry yield values of 1.28 g/cm3 for the solid form. The refractive index of aqueous solutions follows the relationship nD20 = 1.3330 + 0.0018c, where c represents concentration in mg/mL. Solubility in water exceeds 50 mg/mL at pH 7.0 and 25°C, decreasing significantly below pH 4.0 due to reduced electrostatic repulsion between molecules.

Spectroscopic Characteristics

Ultraviolet-visible spectroscopy reveals strong absorption maxima at 280 nm (ε = 12,400 M-1cm-1) attributable to tyrosine and tryptophan residues, with a shoulder at 290 nm characteristic of disulfide bonds. Circular dichroism spectra show minima at 208 nm and 222 nm, indicating significant α-helical content estimated at 35-40%. Fourier transform infrared spectroscopy displays amide I and II bands at 1650 cm-1 and 1545 cm-1, respectively, consistent with mixed α-helical/β-sheet structure. Nuclear magnetic resonance spectroscopy reveals well-dispersed proton chemical shifts between 0.8 and 9.2 ppm, with characteristic cystine β-proton resonances at 2.8-3.2 ppm. 13C NMR shows carbonyl carbon resonances between 171-175 ppm and α-carbon signals between 50-60 ppm. Mass spectrometric analysis confirms the molecular mass of 4091.86 Da with primary fragmentation patterns corresponding to cleavage at aspartic acid-proline bonds.

Chemical Properties and Reactivity

Reaction Mechanisms and Kinetics

Slotoxin demonstrates remarkable stability across a pH range of 2.0-10.0, with decomposition half-life exceeding 48 hours at 25°C. Acid-catalyzed hydrolysis follows first-order kinetics with rate constants of 3.2 × 10-6 s-1 at pH 2.0 and 25°C. Alkaline hydrolysis proceeds more rapidly with k = 8.7 × 10-5 s-1 at pH 10.0, primarily affecting aspartic acid residues. Reduction of disulfide bonds occurs with dithiothreitol (10 mM) with half-time of 15 minutes at pH 8.0 and 25°C, accompanied by complete loss of biological activity. Oxidative degradation by hydrogen peroxide follows second-order kinetics with k = 2.3 M-1s-1 for methionine oxidation. Proteolytic cleavage by trypsin occurs at lysine and arginine residues with kcat/KM = 450 M-1s-1, while chymotrypsin cleavage at phenylalanine and tyrosine proceeds with kcat/KM = 280 M-1s-1.

Acid-Base and Redox Properties

The molecule contains multiple ionizable groups with calculated pKa values distributed across the physiological pH range. Carboxyl groups from aspartic and glutamic acid residues exhibit pKa values between 3.8-4.5, while amino groups from lysine side chains show pKa values of 10.0-10.5. The N-terminal amino group has pKa = 7.9, and the C-terminal carboxyl group displays pKa = 3.2. Histidine residues are absent from the sequence. The isoelectric point calculates to 8.7, consistent with the basic character imparted by numerous lysine residues. Redox properties center on the three disulfide bonds with standard reduction potential E°' = -0.23 V versus standard hydrogen electrode. The methionine residue undergoes oxidation to methionine sulfoxide with E1/2 = 1.05 V at pH 7.0. Tyrosine phenolic group demonstrates oxidation potential of 0.68 V at pH 7.0.

Synthesis and Preparation Methods

Laboratory Synthesis Routes

Solid-phase peptide synthesis represents the primary method for laboratory production of slotoxin. The process employs Fmoc (9-fluorenylmethoxycarbonyl) chemistry on rink amide resin to generate the C-terminal amide. Coupling reactions utilize HBTU (O-benzotriazole-N,N,N',N'-tetramethyluronium-hexafluoro-phosphate) and HOBt (hydroxybenzotriazole) activation with 2.5-fold excess of protected amino acids. Stepwise coupling yields typically exceed 99.5% as monitored by ninhydrin testing. Deprotection of the Fmoc group employs 20% piperidine in dimethylformamide. Following complete chain assembly, cleavage from the resin uses trifluoroacetic acid with scavengers including water, triisopropylsilane, and ethanedithiol. Crude peptide purification proceeds via reverse-phase high-performance liquid chromatography on C18 columns with acetonitrile-water gradients containing 0.1% trifluoroacetic acid. Oxidative folding to form native disulfide bonds employs glutathione redox buffer (2 mM reduced glutathione/0.2 mM oxidized glutathione) at pH 8.0 for 48 hours. Overall yield for the 37-residue peptide typically reaches 15-20% after purification.

Analytical Methods and Characterization

Identification and Quantification

Reverse-phase high-performance liquid chromatography on C18 stationary phase with 0.1% trifluoroacetic acid in water and acetonitrile provides primary analytical separation. Retention time measures 24.3 minutes under gradient conditions of 20-50% acetonitrile over 30 minutes. Mass spectrometric analysis using electrospray ionization confirms molecular mass with observed m/z of 1364.62 for the [M+3H]3+ ion and 1023.72 for the [M+4H]4+ ion. Capillary electrophoresis at pH 2.5 (50 mM phosphate buffer) shows migration time of 12.4 minutes with efficiency of 250,000 theoretical plates. Amino acid analysis following acid hydrolysis (6 M HCl, 110°C, 24 hours) confirms composition with recovery rates exceeding 95% for all residues. Quantitative determination utilizes UV absorption at 280 nm with extinction coefficient ε = 12,400 M-1cm-1. Detection limit in biological matrices measures 0.1 ng/mL using liquid chromatography-tandem mass spectrometry with multiple reaction monitoring.

Purity Assessment and Quality Control

Analytical purity standards require ≥95% homogeneity by analytical HPLC with detection at 214 nm. Common impurities include deletion sequences (1-3%), oxidation products (methionine sulfoxide, 0.5-1.5%), and misfolded disulfide isomers (2-4%). Capillary zone electrophoresis at pH 8.6 reveals misfolded variants with different electrophoretic mobilities. Peptide mapping using tryptic digestion followed by HPLC separation identifies all expected fragments with molecular weights confirmed by mass spectrometry. Heavy metal contamination measures <10 ppm by inductively coupled plasma mass spectrometry. Endotoxin levels in purified preparations remain below 0.1 EU/mg as determined by limulus amebocyte lysate assay. Stability studies indicate that lyophilized material maintains chemical integrity for 24 months at -20°C, while solutions in pH 7.0 buffer retain full activity for 7 days at 4°C.

Applications and Uses

Research Applications and Emerging Uses

Slotoxin serves as a highly specific pharmacological tool for studying large-conductance calcium-activated potassium channels. The compound's differential activity against homomeric (α subunits only) versus heteromeric (α+β subunits) channel configurations provides critical insights into subunit contributions to channel function. Research applications include mapping potassium channel pore architecture through structure-activity relationship studies with synthetic analogs. Emerging uses involve incorporation into biosensor designs for detecting potassium channel expression patterns in cell membranes. The peptide's selective binding properties facilitate development of affinity chromatography matrices for purification of potassium channel proteins. Recent investigations explore slotoxin-derived peptides as templates for designing novel ion channel modulators with tailored specificity profiles.

Historical Development and Discovery

Initial isolation of slotoxin occurred during systematic fractionation of Centruroides noxius venom conducted in the late 1990s. Researchers employed ion-exchange chromatography followed by reverse-phase HPLC to separate venom components, with biological activity monitored using electrophysiological assays on mammalian potassium channels. Structural characterization through Edman degradation and mass spectrometry revealed the complete amino acid sequence in 2001. The discovery that this peptide differentially affected potassium channels based on their subunit composition represented a significant advancement in understanding toxin-channel interactions. Subsequent structure-function studies employing synthetic analogs identified critical residues for channel recognition and binding. The chronological development of slotoxin research parallels advances in peptide synthesis and structural biology techniques that enabled detailed investigation of complex peptide-protein interactions.

Conclusion

Slotoxin exemplifies the sophisticated molecular architecture and precise biological targeting characteristic of disulfide-rich peptide toxins from scorpion venoms. Its well-defined structure featuring three stabilizing disulfide bonds and distinctive distribution of charged and hydrophobic residues enables exceptional specificity for MaxiK potassium channels. The compound's differential activity against various channel subunit combinations provides valuable insights into structure-function relationships in potassium channel biology. Analytical characterization demonstrates the peptide's stability and well-defined physicochemical properties, while synthetic methodologies enable production of material for research applications. Future investigations will likely focus on engineering slotoxin analogs with modified specificity profiles and enhanced pharmacological properties, contributing to both basic research on ion channels and potential therapeutic applications.

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