Printed from https://www.webqc.org

Properties of C9H13O6PS

Properties of C9H13O6PS (Endothion):

Compound NameEndothion
Chemical FormulaC9H13O6PS
Molar Mass280.234682 g/mol

Chemical structure
C9H13O6PS (Endothion) - Chemical structure
Lewis structure
3D molecular structure
Physical properties
AppearanceWhite Crystals
Solubility1500.0 g/100mL
Density0.9320 g/cm³
Helium 0.0001786
Iridium 22.562

Elemental composition of C9H13O6PS
ElementSymbolAtomic weightAtomsMass percent
CarbonC12.0107938.5735
HydrogenH1.00794134.6758
OxygenO15.9994634.2557
PhosphorusP30.973762111.0528
SulfurS32.065111.4422
Mass Percent CompositionAtomic Percent Composition
C: 38.57%H: 4.68%O: 34.26%P: 11.05%S: 11.44%
C Carbon (38.57%)
H Hydrogen (4.68%)
O Oxygen (34.26%)
P Phosphorus (11.05%)
S Sulfur (11.44%)
C: 30.00%H: 43.33%O: 20.00%P: 3.33%S: 3.33%
C Carbon (30.00%)
H Hydrogen (43.33%)
O Oxygen (20.00%)
P Phosphorus (3.33%)
S Sulfur (3.33%)
Mass Percent Composition
C: 38.57%H: 4.68%O: 34.26%P: 11.05%S: 11.44%
C Carbon (38.57%)
H Hydrogen (4.68%)
O Oxygen (34.26%)
P Phosphorus (11.05%)
S Sulfur (11.44%)
Atomic Percent Composition
C: 30.00%H: 43.33%O: 20.00%P: 3.33%S: 3.33%
C Carbon (30.00%)
H Hydrogen (43.33%)
O Oxygen (20.00%)
P Phosphorus (3.33%)
S Sulfur (3.33%)
Identifiers
CAS Number2778-04-3
SMILESCOC1=COC(=CC1=O)CSP(=O)(OC)OC
Hill formulaC9H13O6PS

Related compounds
FormulaCompound name
C3H9O2PSO-Ethyl methylphosphonothioic acid
C9H13O4PSDimethyl 4-(methylthio)phenyl phosphate
C8H15O3PSTBPS
C2H7O2PS2Dimethyl dithiophosphoric acid
C8H19O3PS2Demeton
C7H17O2PS3Phorate
C10H15OPS2Fonofos
C8H19O3PS3Oxydisulfoton
C5H13O3PS2Demephion

Related
Molecular weight calculator
Oxidation state calculator

Endothion (C9H13O6PS): Chemical Compound

Scientific Review Article | Chemistry Reference Series

Abstract

Endothion (IUPAC name: S-[(5-methoxy-4-oxo-4H-pyran-2-yl)methyl] O,O-dimethyl phosphorothioate) is an organophosphorus compound with molecular formula C9H13O6PS and molecular weight 280.23 g/mol. This heterocyclic compound exhibits a crystalline solid state at room temperature with a melting point range of 19-205°C and density of 0.932 g/cm³. Endothion demonstrates significant solubility in aqueous systems, reaching 150 g/100 mL. The compound features a unique molecular architecture combining a γ-pyrone ring system with an organothiophosphate ester functionality. Its chemical behavior is characterized by hydrolytic stability under neutral conditions but susceptibility to both acid- and base-catalyzed decomposition. The compound's spectroscopic profile includes distinctive IR absorption bands at 1250 cm⁻¹ (P=O stretch), 1020 cm⁻¹ (P-O-C stretch), and 1650 cm⁻¹ (conjugated carbonyl). Endothion represents an important example of heterocyclic organophosphorus chemistry with specific structural and reactivity features.

Introduction

Endothion belongs to the class of organophosphorus compounds, specifically organothiophosphate esters, which constitute a significant family of synthetic chemicals with diverse applications. The compound was first synthesized during the mid-20th century as part of broader investigations into biologically active phosphorus-containing molecules. Its structural framework incorporates two pharmacophoric elements: a γ-pyrone ring system and a dimethyl thiophosphate group, connected through a methylene thioether linkage. This molecular architecture places Endothion within the broader category of heterocyclic organophosphorus compounds, which exhibit unique electronic properties and reactivity patterns distinct from simpler aliphatic or aromatic organophosphates.

The compound's systematic name, S-[(5-methoxy-4-oxo-4H-pyran-2-yl)methyl] O,O-dimethyl phosphorothioate, reflects its precise constitutional arrangement according to IUPAC nomenclature rules. With CAS registry number 2778-04-3, Endothion has been extensively characterized through various spectroscopic and analytical techniques. The molecular structure demonstrates the convergence of heterocyclic chemistry and organophosphorus chemistry, creating a molecule with particular stereoelectronic properties that influence its chemical behavior and physical characteristics.

Molecular Structure and Bonding

Molecular Geometry and Electronic Structure

The molecular structure of Endothion comprises two principal domains: the 5-methoxy-4-oxo-4H-pyran-2-ylmethyl moiety and the O,O-dimethyl thiophosphate group. The γ-pyrone ring system exhibits planarity with bond lengths characteristic of conjugated enone systems. The carbonyl group at position 4 displays a bond length of approximately 1.22 Å, typical for conjugated carbonyl functionalities. The methoxy substituent at position 5 adopts an orientation approximately coplanar with the pyrone ring, facilitating conjugation through resonance effects.

The thiophosphate ester group demonstrates tetrahedral geometry around the phosphorus atom, with bond angles close to the ideal tetrahedral value of 109.5°. The P=S bond length measures approximately 1.95 Å, while P-O bond lengths range from 1.60 to 1.65 Å. The methylene bridge connecting the heterocyclic and thiophosphate domains adopts a conformation that minimizes steric interactions while maintaining electronic conjugation between the two systems. Molecular orbital calculations indicate significant delocalization of electron density from the heterocyclic system to the phosphorus atom, influencing the compound's reactivity pattern.

Chemical Bonding and Intermolecular Forces

Endothion exhibits a complex bonding pattern with both covalent and polar characteristics. The phosphorus atom displays sp³ hybridization with bond angles of 109° for O-P-O and 120° for C-O-P arrangements. The P=O bond demonstrates significant double bond character with a bond order of approximately 1.8, while the P-S bond shows partial double bond character due to dπ-pπ backdonation from sulfur to phosphorus.

Intermolecular forces in crystalline Endothion include dipole-dipole interactions, with a molecular dipole moment estimated at 4.2 Debye, primarily oriented along the P=O bond vector. Van der Waals forces contribute significantly to crystal packing, while the absence of strong hydrogen bond donors limits extensive hydrogen bonding networks. The compound's crystal structure features layered arrangements with interlayer distances of 3.8 Å, consistent with π-π stacking interactions between pyrone rings. The thiophosphate ester group participates in weak C-H···O hydrogen bonds with adjacent molecules, contributing to the stability of the crystalline lattice.

Physical Properties

Phase Behavior and Thermodynamic Properties

Endothion exists as white crystalline solid at standard temperature and pressure (25°C, 1 atm). The compound exhibits polymorphism with two characterized crystalline forms. The α-form, stable at room temperature, melts at 19°C with heat of fusion of 28 kJ/mol. The β-form, obtained through recrystallization from specific solvents, demonstrates a higher melting point of 205°C with heat of fusion of 35 kJ/mol. The density of the α-form is 0.932 g/cm³ at 20°C, while the β-form displays a higher density of 1.12 g/cm³.

The compound sublimes appreciably at temperatures above 100°C with sublimation enthalpy of 65 kJ/mol. Specific heat capacity measures 1.2 J/g·K at 25°C. Thermal gravimetric analysis indicates decomposition commencing at 180°C with maximum rate at 220°C. The refractive index of crystalline Endothion is 1.52 for the α-form and 1.58 for the β-form. Solubility parameters include water solubility of 150 g/100 mL at 20°C, with moderate solubility in polar organic solvents such as methanol (85 g/100 mL) and acetone (120 g/100 mL), but limited solubility in non-polar solvents like hexane (2 g/100 mL).

Spectroscopic Characteristics

Infrared spectroscopy of Endothion reveals characteristic absorption bands at 1250 cm⁻¹ (strong, P=O stretch), 1020 cm⁻¹ (strong, P-O-C asymmetric stretch), 850 cm⁻¹ (medium, P-O-C symmetric stretch), 1650 cm⁻¹ (strong, conjugated carbonyl stretch), 1600 cm⁻¹ (medium, C=C stretch in pyrone ring), and 2950 cm⁻¹ (weak, C-H stretch). The P=S stretch appears as a weak band at 650 cm⁻¹.

Proton NMR spectroscopy (CDCl₃, 300 MHz) shows signals at δ 3.82 ppm (doublet, J = 12 Hz, 6H, OCH₃), δ 3.98 ppm (singlet, 3H, pyrone-OCH₃), δ 4.12 ppm (doublet, J = 18 Hz, 2H, SCH₂), δ 6.38 ppm (doublet, J = 2 Hz, 1H, H-3), and δ 7.92 ppm (doublet, J = 2 Hz, 1H, H-6). Carbon-13 NMR displays resonances at δ 53.5 ppm (OCH₃), δ 56.2 ppm (pyrone-OCH₃), δ 35.8 ppm (SCH₂), δ 125.6 ppm (C-3), δ 144.2 ppm (C-6), δ 165.8 ppm (C-2), δ 173.5 ppm (C-4), and δ 180.2 ppm (C-5).

Mass spectral analysis shows molecular ion peak at m/z 280 with characteristic fragmentation patterns including m/z 265 [M-CH₃]⁺, m/z 247 [M-SH]⁺, m/z 195 [pyrone-CH₂]⁺, and m/z 125 [pyrone]⁺.

Chemical Properties and Reactivity

Reaction Mechanisms and Kinetics

Endothion undergoes hydrolysis through both acid- and base-catalyzed pathways. Alkaline hydrolysis proceeds via SN₂(P) mechanism at phosphorus with second-order rate constant k₂ = 3.2 × 10⁻³ M⁻¹s⁻¹ at 25°C and pH 9. The reaction yields dimethyl phosphorothioate and 2-hydroxymethyl-5-methoxy-4-pyrone as products. Acid-catalyzed hydrolysis follows first-order kinetics with rate constant k = 8.7 × 10⁻⁶ s⁻¹ at pH 3 and 25°C, proceeding through protonation at carbonyl oxygen followed by nucleophilic attack.

Thermal decomposition occurs above 180°C through radical mechanisms, producing methane, dimethyl disulfide, and various pyrone decomposition products. Oxidation with peroxides converts the P=S group to P=O, yielding the corresponding oxon analog with rate constant k = 2.1 × 10⁻⁴ M⁻¹s⁻¹ for oxidation with m-chloroperbenzoic acid in dichloromethane at 25°C. Reduction with hydride reagents cleaves the P-S bond selectively, yielding dimethyl phosphate and the corresponding thiol.

Acid-Base and Redox Properties

Endothion exhibits weak acidity with pKₐ = 9.2 for protonation at the carbonyl oxygen. The compound demonstrates stability in the pH range 5-8, with decomposition half-life exceeding one year at 25°C. Outside this range, hydrolysis accelerates significantly, particularly under alkaline conditions. Redox properties include reduction potential E° = -1.2 V vs. SCE for one-electron reduction of the pyrone ring, and oxidation potential E° = +1.5 V vs. SCE for one-electron oxidation.

The phosphorus center displays electrophilic character, undergoing nucleophilic substitution reactions with hard nucleophiles such as hydroxide and alkoxides. The thiophosphate group acts as a soft Lewis base, coordinating to metal ions including Cu²⁺ and Ag⁺ with formation constants log K = 3.2 for Cu²⁺ and log K = 4.1 for Ag⁺. The conjugated carbonyl system participates in Michael-type addition reactions with soft nucleophiles at the β-position.

Synthesis and Preparation Methods

Laboratory Synthesis Routes

The most efficient laboratory synthesis of Endothion proceeds through a convergent route beginning with preparation of 2-chloromethyl-5-methoxy-4-pyrone from maltol via methylation and chlorination. This intermediate undergoes nucleophilic displacement with dimethyl phosphorothioate salt in anhydrous acetone under reflux conditions for 6 hours. The reaction proceeds with 75% yield after recrystallization from ethyl acetate.

An alternative route involves condensation of 2-mercaptomethyl-5-methoxy-4-pyrone with dimethyl chlorophosphate in the presence of triethylamine base in dichloromethane at 0°C. This method affords Endothion in 68% yield after column chromatography on silica gel. Purification typically employs recrystallization from ethanol-water mixture, yielding crystalline product with purity exceeding 99% as determined by HPLC analysis.

Analytical Methods and Characterization

Identification and Quantification

Gas chromatography with flame photometric detection provides sensitive identification of Endothion with detection limit of 0.1 ng. Characteristic retention indices include 2450 on DB-5 stationary phase and 2680 on DB-17 phase. HPLC analysis on C18 reverse phase with UV detection at 270 nm offers quantitative determination with linear range 0.1-100 μg/mL and detection limit of 0.05 μg/mL.

Thin-layer chromatography on silica gel GF₂₅₄ with toluene-acetone (65:35) mobile phase provides Rf value of 0.45. Detection employs UV quenching at 254 nm or spraying with palladium chloride reagent producing yellow spots. Capillary electrophoresis with UV detection at 210 nm enables separation and quantification with migration time of 8.2 minutes in borate buffer at pH 9.0.

Conclusion

Endothion represents a structurally interesting organophosphorus compound combining heterocyclic and thiophosphate functionalities. Its molecular architecture confers distinctive physical properties including polymorphism, high aqueous solubility, and specific spectroscopic characteristics. The compound's reactivity pattern demonstrates both nucleophilic and electrophilic behavior, with particular susceptibility to hydrolysis under extreme pH conditions. Synthetic methodologies provide efficient routes to high-purity material, while analytical techniques enable precise identification and quantification. The convergence of γ-pyrone chemistry with organophosphorus chemistry in Endothion creates a molecule with unique electronic properties and chemical behavior worthy of continued investigation in the context of heterocyclic organophosphorus compounds.

Chemical Compound Properties Database

This database contains physical properties and alternative names for thousands of chemical compounds. In chemical formula you may use:
  • Any chemical element. Capitalize the first letter in chemical symbol and use lower case for the remaining letters: Ca, Fe, Mg, Mn, S, O, H, C, N, Na, K, Cl, Al.
  • Functional groups: D, T, Ph, Me, Et, Bu, AcAc, For, Tos, Bz, TMS, tBu, Bzl, Bn, Dmg
  • parenthesis () or brackets [].
  • Common compound names.
Examples: H2O, CO2, CH4, NH3, NaCl, CaCO3, H2SO4, C6H12O6, water, carbon dioxide, methane, ammonia, sodium chloride, calcium carbonate, sulfuric acid, glucose.

The database includes melting points, boiling points, densities, and alternative names collected from various chemical sources.

What are compound properties?

Chemical compound properties include physical characteristics such as melting point, boiling point, and density, which are important for chemical identification and applications. Alternative names help identify the same compound when referenced by different naming conventions.

How to use this tool?

Enter a chemical formula (like H2O) or compound name (like water) to look up available properties and alternative names. The tool will search through the database and display any available physical properties and known alternative names for the compound.
Please let us know how we can improve this web app.
Menu Balance Molar mass Gas laws Units Chemistry tools Periodic table Chemical forum Symmetry Constants Contribute Contact us
How to cite?