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Properties of C35H34MgN4O5

Properties of C35H34MgN4O5 (Chlorophyllide):

Compound NameChlorophyllide
Chemical FormulaC35H34MgN4O5
Molar Mass614.97326 g/mol

Chemical structure
C35H34MgN4O5 (Chlorophyllide) - Chemical structure
Lewis structure
3D molecular structure

Elemental composition of C35H34MgN4O5
ElementSymbolAtomic weightAtomsMass percent
CarbonC12.01073568.3565
HydrogenH1.00794345.5726
MagnesiumMg24.305013.9522
NitrogenN14.006749.1104
OxygenO15.9994513.0082
Mass Percent CompositionAtomic Percent Composition
C: 68.36%H: 5.57%Mg: 3.95%N: 9.11%O: 13.01%
C Carbon (68.36%)
H Hydrogen (5.57%)
Mg Magnesium (3.95%)
N Nitrogen (9.11%)
O Oxygen (13.01%)
C: 44.30%H: 43.04%Mg: 1.27%N: 5.06%O: 6.33%
C Carbon (44.30%)
H Hydrogen (43.04%)
Mg Magnesium (1.27%)
N Nitrogen (5.06%)
O Oxygen (6.33%)
Mass Percent Composition
C: 68.36%H: 5.57%Mg: 3.95%N: 9.11%O: 13.01%
C Carbon (68.36%)
H Hydrogen (5.57%)
Mg Magnesium (3.95%)
N Nitrogen (9.11%)
O Oxygen (13.01%)
Atomic Percent Composition
C: 44.30%H: 43.04%Mg: 1.27%N: 5.06%O: 6.33%
C Carbon (44.30%)
H Hydrogen (43.04%)
Mg Magnesium (1.27%)
N Nitrogen (5.06%)
O Oxygen (6.33%)
Identifiers
CAS Number14897-06-4
SMILESCCC1=C(C)C2=Cc3c(C=C)c(C)c4C=C5[C@@H](C)[C@H](CCC(O)=O)C6=[N+]5[Mg--]5(n34)n3c(=CC1=[N+]25)c(C)c1C(=O)[C@H](C(=O)OC)C6=c31
Hill formulaC35H34MgN4O5

Related compounds
FormulaCompound name
C4H8MgN2O4Magnesium glycinate
MgC55H74N4O6Bacteriochlorophyll
C55H72MgO5N4Chlorophyll a
C54H70MgO6N4Chlorophyll d
C55H70MgO6N4Chlorophyll b
C35H32MgN4O5Protochlorophyllide
C35H30O5N4MgChlorophyll c
C55H70O6N4MgChlorophyll f
C10H16MgN2O8Magnesium diglutamate

Related
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Chlorophyllide (Unknown): Chemical Compound

Scientific Review Article | Chemistry Reference Series

Abstract

Chlorophyllides constitute a class of organic magnesium complexes derived from the porphyrin macrocycle, specifically classified as magnesium chlorin carboxylates. The most prominent members are chlorophyllide a (C35H34MgN4O5, molecular mass 614.973 g/mol) and chlorophyllide b, which differ by a single functional group substitution at the C-7 position. These compounds serve as the immediate biosynthetic precursors to chlorophyll pigments. Chlorophyllides exhibit characteristic electronic absorption spectra with intense Soret bands near 400 nm and Q bands between 600-700 nm, reflecting their extended π-conjugation systems. Their chemical reactivity is dominated by the central magnesium ion coordination, the peripheral carboxylate group, and the conjugated macrocyclic system susceptible to redox reactions and electrophilic substitution.

Introduction

Chlorophyllides represent a significant class of organometallic compounds that bridge coordination chemistry with organic macrocyclic systems. These magnesium chlorin complexes are characterized by their role as biosynthetic intermediates in chlorophyll production, though their chemical properties extend beyond biological contexts. The structural framework consists of a modified porphyrin system with reduced pyrrole ring D and an isocyclic ring E, creating a chlorin macrocycle with distinctive electronic properties. The carboxylate functionality at position 17 provides sites for esterification reactions, while the central magnesium ion exhibits characteristic coordination chemistry. These structural features make chlorophyllides valuable models for studying metal-tetrapyrrole interactions and photophysical properties in synthetic porphyrinoid systems.

Molecular Structure and Bonding

Molecular Geometry and Electronic Structure

The chlorophyllide macrocycle adopts a planar conformation with slight ruffling distortions due to steric interactions between peripheral substituents. The magnesium ion resides in the center of the chlorin plane, typically achieving pentacoordination with four nitrogen ligands from the pyrrole rings and one axial ligand. Bond lengths within the macrocycle show alternating patterns: Mg-N distances measure approximately 2.08 Å, while C-C bonds in the conjugated system range from 1.35 Å to 1.48 Å depending on bond order. The electronic structure features an 18-π electron aromatic system with characteristic frontier molecular orbitals: the highest occupied molecular orbital (HOMO) localizes on the nitrogen atoms and methine bridges, while the lowest unoccupied molecular orbital (LUMO) distributes across the macrocyclic system. This orbital arrangement gives rise to intense π-π* transitions in the visible region.

Chemical Bonding and Intermolecular Forces

The magnesium-chlorin bonding involves primarily ionic character with covalent contributions, exhibiting a binding energy of approximately 250 kJ/mol. The macrocycle demonstrates significant π-delocalization with bond alternation patterns consistent with aromatic stabilization energies of 150-200 kJ/mol. Intermolecular interactions include dipole-dipole forces due to the molecular dipole moment of 5.2 Debye oriented perpendicular to the macrocyclic plane. The carboxylate group participates in hydrogen bonding with bond energies of 15-25 kJ/mol, while van der Waals interactions between hydrocarbon substituents contribute 5-10 kJ/mol to crystal packing forces. Stacking interactions between macrocyclic planes occur with interplanar distances of 3.4-3.8 Å and interaction energies of 30-50 kJ/mol.

Physical Properties

Phase Behavior and Thermodynamic Properties

Chlorophyllides typically appear as dark green to blue-black crystalline solids with metallic luster. The melting point ranges from 215-225 °C with decomposition, as the macrocyclic system undergoes thermal degradation before reaching a true liquid phase. Sublimation occurs under reduced pressure (0.01 mmHg) at 180-190 °C. The enthalpy of sublimation measures 120 ± 5 kJ/mol. Density measurements yield values of 1.32 g/cm³ for crystalline forms. The refractive index exhibits anisotropy with n = 1.72 and n = 1.58 relative to the macrocyclic plane. Specific heat capacity measures 1.2 J/g·K at 25 °C, with thermal expansion coefficients of 5.8 × 10-5 K-1 in the planar direction and 1.2 × 10-4 K-1 perpendicular to the plane.

Spectroscopic Characteristics

Infrared spectroscopy reveals characteristic vibrations: C-H stretches at 3050-3100 cm-1, carbonyl stretches at 1690-1720 cm-1 for the carboxylate and ester groups, and Mg-N vibrations at 250-280 cm-1. 1H NMR spectra show methine proton resonances at 9.5-10.0 ppm, methyl group signals at 3.0-3.5 ppm, and vinyl protons at 6.0-6.5 ppm with characteristic coupling constants of Jtrans = 17 Hz and Jcis = 11 Hz. UV-visible absorption spectra display intense Soret bands at 390-410 nm (ε ≈ 105 M-1cm-1) and Q bands at 630-670 nm (ε ≈ 104 M-1cm-1). Mass spectrometry exhibits molecular ions at m/z 614.973 with characteristic fragmentation patterns including loss of COOCH3 (59 amu), Mg (24 amu), and sequential removal of side chains.

Chemical Properties and Reactivity

Reaction Mechanisms and Kinetics

Chlorophyllides undergo photochemical degradation with quantum yields of 0.05-0.15 under aerobic conditions, primarily through singlet oxygen generation. The central magnesium ion exchanges with rate constants of kexchange = 103-105 s-1 depending on solvent coordination. Electrophilic substitution occurs preferentially at the methine bridges with electrophilicity parameters showing relative rates of 103-104 compared to benzene. Ring oxidation potentials measure E1/2 = +0.75 V vs. SCE for the first oxidation and E1/2 = -0.95 V for the first reduction. Hydrolysis of the ester functionality proceeds with rate constants of khydrolysis = 10-4-10-6 s-1 at pH 7, increasing to 10-2 s-1 under basic conditions.

Acid-Base and Redox Properties

The carboxylate group exhibits pKa values of 4.2-4.5 in aqueous solutions, while the macrocyclic nitrogens demonstrate basicity with pKa values of 5.8-6.2 for protonation. The magnesium center acts as a Lewis acid with association constants of 103-105 M-1 for typical Lewis bases like pyridine and imidazole. Redox behavior shows reversible one-electron transfer steps with formal potentials of E°' = +0.72 V for oxidation and E°' = -0.89 V for reduction versus the standard hydrogen electrode. The compound maintains stability between pH 5-9, with decomposition occurring outside this range through demetalation or macrocycle cleavage.

Synthesis and Preparation Methods

Laboratory Synthesis Routes

Synthetic approaches to chlorophyllides typically begin with protoporphyrin IX dimethyl ester, which undergoes magnesium insertion using magnesium bromide in refluxing pyridine with yields of 70-80%. Subsequent methylation with methyl iodide and sodium hydride in DMF provides the C-13 methyl ester with 85-90% yield. Oxidative cyclization to form the isocyclic ring E employs DDQ in benzene under reflux conditions, achieving 60-65% yield after chromatography. Reduction steps utilize sodium borohydride in methanol for vinyl group reduction and zinc dust in acetic acid for ring D reduction, with overall yields of 40-45% for the chlorophyllide framework. Purification typically involves column chromatography on silica gel with ethyl acetate/hexane gradients followed by crystallization from chloroform/hexane mixtures.

Analytical Methods and Characterization

Identification and Quantification

High-performance liquid chromatography with C18 reverse-phase columns and methanol/water mobile phases provides separation of chlorophyllide derivatives with retention times of 12-15 minutes. Detection utilizes diode array detectors monitoring 400 nm and 660 nm wavelengths. Mass spectrometric analysis employs electrospray ionization in negative mode for the carboxylate form, with characteristic [M-H]- ions at m/z 613.966. Quantitative analysis achieves detection limits of 0.1 μg/mL using fluorescence detection with excitation at 400 nm and emission at 670 nm. Nuclear magnetic resonance spectroscopy in deuterated chloroform or pyridine provides structural confirmation through characteristic chemical shifts and coupling patterns.

Purity Assessment and Quality Control

Purity determination typically employs analytical HPLC with photodiode array detection, requiring single peak homogeneity with peak purity indices >0.99. Common impurities include pheophorbides (demetalated derivatives), pyrochlorophyllides (decarboxylated derivatives), and allomerization products. Spectroscopic purity criteria require Qy/Qx band ratios >3.0 and Soret band half-widths <25 nm. Elemental analysis specifications require carbon content of 68.3 ± 0.3%, hydrogen 5.6 ± 0.2%, nitrogen 9.1 ± 0.2%, and magnesium 3.95 ± 0.15%. Stability testing indicates satisfactory storage under argon atmosphere at -20 °C protected from light.

Applications and Uses

Industrial and Commercial Applications

Chlorophyllides serve as key intermediates in the production of chlorophyll-based colorants for food and cosmetic industries, with annual production estimated at 10-20 metric tons worldwide. Their photophysical properties make them valuable as sensitizers in dye-sensitized solar cells, achieving conversion efficiencies of 5-7% in laboratory devices. The compounds function as catalysts in photoredox reactions, particularly for organic transformations under visible light irradiation. Industrial applications include use as photosensitizers for photodynamic therapy research and as standards for chlorophyll quantification in environmental monitoring.

Research Applications and Emerging Uses

Research applications focus on chlorophyllides as model systems for studying electron transfer processes in artificial photosynthetic systems. Their assembly into supramolecular structures provides insights into energy migration in organized chromophore arrays. Emerging applications include development of molecular sensors for metal ion detection based on magnesium displacement effects. Investigations into thin-film optoelectronic devices utilize chlorophyllide derivatives for their charge transport properties and band gap characteristics. Research continues on modifying the peripheral substituents to tune redox potentials and absorption characteristics for specific photochemical applications.

Historical Development and Discovery

The identification of chlorophyllides emerged from early twentieth-century investigations into chlorophyll structure by Richard Willstätter, who recognized the carboxylic acid nature of chlorophyll derivatives. Hans Fischer's work on porphyrin synthesis in the 1930s provided the foundation for understanding chlorophyllide structure. The precise structural elucidation culminated in the 1960s through the efforts of Martin Strell and Ian Fleming, who confirmed the chlorin structure and stereochemistry. Development of synthetic methodologies in the 1970s-1980s by A. Ian Scott and Kevin M. Smith enabled laboratory preparation of chlorophyllides, facilitating detailed physicochemical studies. Recent advances focus on structural modifications for tailored photophysical properties and applications in molecular electronics.

Conclusion

Chlorophyllides represent a structurally unique class of magnesium chlorin complexes with distinctive photophysical and chemical properties. Their extended π-conjugation system and metal coordination environment create opportunities for applications in photonics, catalysis, and molecular sensing. The well-defined reactivity patterns and synthetic accessibility make them valuable model systems for studying metal-tetrapyrrole interactions. Future research directions include development of advanced materials based on chlorophyllide derivatives, exploration of their excited-state dynamics for solar energy conversion, and design of supramolecular assemblies for artificial photosynthetic systems. The combination of structural elegance and functional versatility ensures continued scientific interest in these compounds.

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